RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 HDHD5Q9BXW7 423 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 OR2B2Q9GZK3 357 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 CLCA2Q9UQC9 943 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 GSTK1Q9Y2Q3 226 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 FAM47E-STBD1D6RA91 191 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 RGS13O14921 159 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 CASKO14936 926 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 SURF4O15260 269 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 NCR1O76036 304 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 SLC2A10O95528 541 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 ASGR2P07307 311 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 AHRP35869 848 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 RGS8P57771 180 aaPredicted RBP18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 ZNF791Q3KP31 576 aaPredicted RBP18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 C2orf27AQ580R0 203 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 C6orf132Q5T0Z8 1188 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 GIMAP5Q96F15 307 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 RAB11FIP5Q9BXF6 653 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 TBC1D17Q9HA65 648 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 ISYNA1Q9NPH2 558 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 MALT1Q9UDY8 824 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 STON1Q9Y6Q2 735 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 CCDC182A6NF36 153 aa18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 PLA2G10O15496 165 aa18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 APEX1P27695 318 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 GJA4P35212 333 aa18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 DDOSTP39656 456 aa18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 BTN3A2P78410 334 aa18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 C6orf183Q5T699 404 aa18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 AADACL4Q5VUY2 407 aa18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 CD200R1LQ6Q8B3 271 aa18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 FAM111BQ6SJ93 734 aa18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 PLEKHM3Q6ZWE6 761 aa18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 GET4Q7L5D6 327 aaPredicted RBP18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 POGLUT1Q8NBL1 392 aa18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 KCT2Q8NC54 265 aa18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 SLC16A11Q8NCK7 471 aa18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 SIMC1Q8NDZ2 872 aa18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 TMEM255BQ8WV15 326 aa18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 AP3S1Q92572 193 aa18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 BADQ92934 168 aa18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 CHFRQ96EP1 664 aa18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 SLC35A4Q96G79 324 aa18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 TIMM29Q9BSF4 260 aa18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 NDRG2Q9UN36 371 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-225ENST00000600733 B4DXG7 233 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 CELP19835 753 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 FGF9P31371 208 aaPredicted RBP18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 ZNF155Q12901 538 aaPredicted RBP18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 SLC35F1Q5T1Q4 408 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 PPP2R2DQ66LE6 453 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 TANGO2Q6ICL3 276 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 PSRC1Q6PGN9 363 aaPredicted RBP18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 VITQ6UXI7 678 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 ACOT11Q8WXI4 607 aaPredicted RBP18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 PRRG3Q9BZD7 231 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 CSNK1G3Q9Y6M4 447 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 ZNF780BQ9Y6R6 833 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 SCN2AQ99250 2005 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 A0A0B4J293 547 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 SHISA3A0PJX4 238 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 CLDN2P57739 230 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 MRPS15P82914 257 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 GDF7Q7Z4P5 450 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 ABI3BPQ7Z7G0 1075 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 GJD3Q8N144 294 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 COL26A1Q96A83 441 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 RNF31Q96EP0 1072 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 MCHR1Q99705 422 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 TTYH2Q9BSA4 534 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 ACTRT3Q9BYD9 372 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 RSPH9Q9H1X1 276 aaPredicted RBP18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 BOLA1Q9Y3E2 137 aa18.91■□□□□ 0.62
SHKBP1-225ENST00000600733 SEC14L5O43304 696 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 HPGDSO60760 199 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 FPR3P25089 353 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 KIR2DL3P43628 341 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 RPS5P46782 204 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 RPE65Q16518 533 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 TMEM240Q5SV17 173 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 CNIH2Q6PI25 160 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 B3GLCTQ6Y288 498 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 RDH10Q8IZV5 341 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 ARIH2OSQ8N7S6 290 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 OR7G2Q8NG99 324 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 ADAMTS15Q8TE58 950 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 OSTF1Q92882 214 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 RFKQ969G6 155 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 ZNF649Q9BS31 505 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 IL20Q9NYY1 176 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 NUFIP1Q9UHK0 495 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 TRDV1A0A1B0GX56 115 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 HMX3A6NHT5 357 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 FAM183AA6NL82 134 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 CENPXA8MT69 81 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 ISM1B1AKI9 464 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 CDC42EP2O14613 210 aa18.9■□□□□ 0.62
SHKBP1-225ENST00000600733 PRKAR1BP31321 381 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms