RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 ELAVL4P26378 380 aaKnown RBP14.09□□□□□ -0.15
HIF3A-218ENST00000600383 PRKAR1BP31321 381 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 MPLP40238 635 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 MAP3K8P41279 467 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 RGS8P57771 180 aaPredicted RBP14.09□□□□□ -0.15
HIF3A-218ENST00000600383 ISL1P61371 349 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 ACY1Q03154 408 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 CD47Q08722 323 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 NPTX1Q15818 432 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 SHISA6Q6ZSJ9 500 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 SATL1Q86VE3 508 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 ZNF614Q8N883 585 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 CHDHQ8NE62 594 aaPredicted RBP14.09□□□□□ -0.15
HIF3A-218ENST00000600383 SLC7A13Q8TCU3 470 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 OR1F2PQ96R84 312 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 GFM1Q96RP9 751 aaKnown RBP14.09□□□□□ -0.15
HIF3A-218ENST00000600383 SATB2Q9UPW6 733 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 AGAP5A6NIR3 686 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 PRAMEF2O60811 474 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 KCNK2O95069 426 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 NKX2-2O95096 273 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 CCNYL3P0C7X3 344 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 RPL5P46777 297 aaKnown RBP14.09□□□□□ -0.15
HIF3A-218ENST00000600383 GCGRP47871 477 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 FOXL2P58012 376 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 SMIM11AP58511 58 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 TAS2R41P59536 307 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 NSDHLQ15738 373 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 CTU2Q2VPK5 515 aaKnown RBP14.09□□□□□ -0.15
HIF3A-218ENST00000600383 ZNF528Q3MIS6 628 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 EXOSC6Q5RKV6 272 aaKnown RBP14.09□□□□□ -0.15
HIF3A-218ENST00000600383 ZNF836Q6ZNA1 936 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 ZAR1Q86SH2 424 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 SLC38A9Q8NBW4 561 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 C16orf52Q8NHV5 167 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 CNIH3Q8TBE1 160 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 UBE2FQ969M7 185 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 SENP5Q96HI0 755 aaPredicted RBP14.09□□□□□ -0.15
HIF3A-218ENST00000600383 KCNE5Q9UJ90 142 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 MKL2Q9ULH7 1088 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 NTNG1Q9Y2I2 539 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 CLCA3PQ9Y6N3 262 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 GPR179Q6PRD1 2367 aa14.09□□□□□ -0.15
HIF3A-218ENST00000600383 SYT5O00445 386 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 TIAF1O95411 115 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 LINGO3P0C6S8 592 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 AGXTP21549 392 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 APOFQ13790 326 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 PROX2Q3B8N5 592 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 PWWP2BQ6NUJ5 590 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 TMEM151BQ8IW70 566 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 PTPMT1Q8WUK0 201 aaPredicted RBP14.08□□□□□ -0.16
HIF3A-218ENST00000600383 VSTM2LQ96N03 204 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 APOL4Q9BPW4 351 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 OR8D2Q9GZM6 311 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 RASSF1Q9NS23 344 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 ACAD8Q9UKU7 415 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 RARRES3Q9UL19 164 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 POFUT2Q9Y2G5 429 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 OR10H1Q9Y4A9 318 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 KHNYNO15037 678 aaKnown RBP14.08□□□□□ -0.16
HIF3A-218ENST00000600383 BRINP1O60477 761 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 IFI6P09912 130 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 ANKRD34CP0C6C1 535 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 TRHRP34981 398 aaPredicted RBP14.08□□□□□ -0.16
HIF3A-218ENST00000600383 DUSP3P51452 185 aaPredicted RBP14.08□□□□□ -0.16
HIF3A-218ENST00000600383 FUT7Q11130 342 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 IL18R1Q13478 541 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 KEAP1Q14145 624 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 KCTD21Q4G0X4 260 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 FLYWCH1Q4VC44 716 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 C6orf141Q5SZD1 244 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 FAAH2Q6GMR7 532 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 PODNL1Q6PEZ8 512 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 DHRS4L2Q6PKH6 230 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 ZNF321PQ8N8H1 164 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 SETD9Q8NE22 299 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 PRRC1Q96M27 445 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 ARHGDIGQ99819 225 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 LMF2Q9BU23 707 aaKnown RBP14.08□□□□□ -0.16
HIF3A-218ENST00000600383 ENAMQ9NRM1 1142 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 CTSFQ9UBX1 484 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 NDRG4Q9ULP0 352 aaKnown RBP14.08□□□□□ -0.16
HIF3A-218ENST00000600383 MMACHCQ9Y4U1 282 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 R4GN57 208 aa14.08□□□□□ -0.16
HIF3A-218ENST00000600383 AP3D1O14617 1153 aa14.07□□□□□ -0.16
HIF3A-218ENST00000600383 SCRG1O75711 98 aa14.07□□□□□ -0.16
HIF3A-218ENST00000600383 AK1P00568 194 aa14.07□□□□□ -0.16
HIF3A-218ENST00000600383 DBIP07108 87 aaKnown RBP14.07□□□□□ -0.16
HIF3A-218ENST00000600383 GKN3PP0CG01 181 aa14.07□□□□□ -0.16
HIF3A-218ENST00000600383 POU1F1P28069 291 aa14.07□□□□□ -0.16
HIF3A-218ENST00000600383 RYKP34925 604 aa14.07□□□□□ -0.16
HIF3A-218ENST00000600383 LSM11P83369 360 aaKnown RBP eCLIP14.07□□□□□ -0.16
HIF3A-218ENST00000600383 TARDBPQ13148 414 aaKnown RBP eCLIP14.07□□□□□ -0.16
HIF3A-218ENST00000600383 CDK5R2Q13319 367 aa14.07□□□□□ -0.16
HIF3A-218ENST00000600383 BIKQ13323 160 aa14.07□□□□□ -0.16
HIF3A-218ENST00000600383 LIN52Q52LA3 116 aa14.07□□□□□ -0.16
HIF3A-218ENST00000600383 ENTPD8Q5MY95 495 aa14.07□□□□□ -0.16
HIF3A-218ENST00000600383 YOD1Q5VVQ6 348 aaPredicted RBP14.07□□□□□ -0.16
HIF3A-218ENST00000600383 FOXB2Q5VYV0 432 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms