RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 PSME3P61289 254 aa18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 TXNL4AP83876 142 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 SLC25A3Q00325 362 aa18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 FADDQ13158 208 aa18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 DECR1Q16698 335 aa18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 ARHGAP11BQ3KRB8 267 aa18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 LACTB2Q53H82 288 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 ASB18Q6ZVZ8 466 aa18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 MDGA2Q7Z553 956 aa18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 SLC15A3Q8IY34 581 aa18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 DIO2Q92813 273 aa18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 COL21A1Q96P44 957 aa18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 HES7Q9BYE0 225 aa18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 KAT8Q9H7Z6 458 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 SH2D2AQ9NP31 389 aa18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 EXD2Q9NVH0 621 aa18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 GMPR2Q9P2T1 348 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 LHX6Q9UPM6 363 aa18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 LOC400499M0QZD8 3231 aa18.4■□□□□ 0.54
SHKBP1-222ENST00000600320 NPIPA5A0A0B4J1W7 369 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 OR6C70A6NIJ9 312 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 NPIPA7E9PJI5 369 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 CDK2AP1O14519 115 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 AGR2O95994 175 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 NPIPA8P0DM63 369 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 CCL3P10147 92 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 IL12BP29460 328 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 KRT20P35900 424 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 TNFSF10P50591 281 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 PNLIPRP2P54317 469 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 PSPHP78330 225 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 SYPL1Q16563 259 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 GCNT6Q5T4J0 391 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 RTL4Q6ZR62 310 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 RINLQ6ZS11 566 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 C16orf62Q7Z3J2 963 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 ZADH2Q8N4Q0 377 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 FAM13CQ8NE31 585 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 OR10A6Q8NH74 314 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 SPPL2AQ8TCT8 520 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 TM9SF4Q92544 642 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 MAL2Q969L2 176 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 HOPXQ9BPY8 73 aaPredicted RBP18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 MFRPQ9BY79 579 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 RYDENQ9NUL5 291 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 CNOT11Q9UKZ1 510 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 USP22Q9UPT9 525 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 CORO2BQ9UQ03 480 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 PCDHGB3Q9Y5G1 929 aa18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 CHCHD2Q9Y6H1 151 aaPredicted RBP18.39■□□□□ 0.53
SHKBP1-222ENST00000600320 MGAQ8IWI9 3026 aa18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 B2RBV5 119 aa18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 ICOSLGO75144 302 aa18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 SOX30O94993 753 aa18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 AK1P00568 194 aa18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 CHRM4P08173 479 aa18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 TFPTP0C1Z6 253 aa18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 TMED10P49755 219 aaKnown RBP18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 SLC7A2P52569 658 aa18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 LY6DQ14210 128 aa18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 ADRM1Q16186 407 aa18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 ATAD3BQ5T9A4 648 aa18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 NUP54Q7Z3B4 507 aa18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 NET1Q7Z628 596 aaPredicted RBP18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 CALHM3Q86XJ0 350 aa18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 PTOV1Q86YD1 416 aa18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 DND1Q8IYX4 353 aaKnown RBP18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 ZNF350Q9GZX5 532 aa18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 PIF1Q9H611 641 aa18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 RUBCNLQ9H714 662 aa18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 A4GALTQ9NPC4 353 aa18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 MRTO4Q9UKD2 239 aaKnown RBP18.38■□□□□ 0.53
SHKBP1-222ENST00000600320 CNTRLQ7Z7A1 2325 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 C15orf38-AP3S2A0A0A6YYH1 394 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 NME4O00746 187 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 FCMRO60667 390 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 SLC25A12O75746 678 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 UTS2O95399 124 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 BCHEP06276 602 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 ARAFP10398 606 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 CPOXP36551 454 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 MXRA7P84157 204 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 CHRNEQ04844 493 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 BNIP1Q12981 228 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 EFR3AQ14156 821 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 GRAMD1BQ3KR37 738 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 GPAT3Q53EU6 434 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 BICRALQ6AI39 1079 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 TYW3Q6IPR3 259 aaKnown RBP18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 FRRS1Q6ZNA5 592 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 Q6ZS92 163 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 ARPINQ7Z6K5 226 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 ZZZ3Q8IYH5 903 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 PGAM4Q8N0Y7 254 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 GOLM1Q8NBJ4 401 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 RBM15BQ8NDT2 890 aaKnown RBP18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 PAQR8Q8TEZ7 354 aa18.37■□□□□ 0.53
SHKBP1-222ENST00000600320 SLC38A5Q8WUX1 472 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms