RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 CASP9P55211 416 aa17.75■□□□□ 0.43
UPF1-209ENST00000600310 GPR85P60893 370 aa17.75■□□□□ 0.43
UPF1-209ENST00000600310 INPP5JQ15735 1006 aaPredicted RBP17.75■□□□□ 0.43
UPF1-209ENST00000600310 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.75■□□□□ 0.43
UPF1-209ENST00000600310 PRAMEF20Q5VT98 475 aa17.75■□□□□ 0.43
UPF1-209ENST00000600310 RETREG3Q86VR2 466 aa17.75■□□□□ 0.43
UPF1-209ENST00000600310 OR2M7Q8NG81 312 aa17.75■□□□□ 0.43
UPF1-209ENST00000600310 NTNG2Q96CW9 530 aa17.75■□□□□ 0.43
UPF1-209ENST00000600310 SNRNP40Q96DI7 357 aaKnown RBP17.75■□□□□ 0.43
UPF1-209ENST00000600310 FRMD6Q96NE9 622 aa17.75■□□□□ 0.43
UPF1-209ENST00000600310 FAM173AQ9BQD7 235 aa17.75■□□□□ 0.43
UPF1-209ENST00000600310 MYLK2Q9H1R3 596 aa17.75■□□□□ 0.43
UPF1-209ENST00000600310 SLC25A37Q9NYZ2 338 aa17.75■□□□□ 0.43
UPF1-209ENST00000600310 SLAMF8Q9P0V8 285 aa17.75■□□□□ 0.43
UPF1-209ENST00000600310 HELZ2Q9BYK8 2649 aaKnown RBP17.75■□□□□ 0.43
UPF1-209ENST00000600310 TRBV5-3A0A0A0MS03 114 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 A0A0G2JMM0 328 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 A0A1W2PPB8 328 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 A0A1W2PRS3 328 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 KIR3DP1A8MWS1 328 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 G3V3Y1 287 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 HS6ST1O60243 411 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 AGR2O95994 175 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 OR12D1P0DN82 309 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 CYP4B1P13584 511 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 LCN1P31025 176 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 KHKP50053 298 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 MEOX1P50221 254 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 ANXA11P50995 505 aaKnown RBP17.74■□□□□ 0.43
UPF1-209ENST00000600310 MVDP53602 400 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 TNFAIP8L2Q6P589 184 aaPredicted RBP17.74■□□□□ 0.43
UPF1-209ENST00000600310 FIGNL1Q6PIW4 674 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 ANGPTL8Q6UXH0 198 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 DLEU7Q6UYE1 221 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 MSRB3Q8IXL7 192 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 ZFP62Q8NB50 900 aaPredicted RBP17.74■□□□□ 0.43
UPF1-209ENST00000600310 POGLUT1Q8NBL1 392 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 CHDHQ8NE62 594 aaPredicted RBP17.74■□□□□ 0.43
UPF1-209ENST00000600310 RNF138Q8WVD3 245 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 AURKBQ96GD4 344 aaPredicted RBP17.74■□□□□ 0.43
UPF1-209ENST00000600310 G6PC3Q9BUM1 346 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 CCDC106Q9BWC9 280 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 ANGPTL4Q9BY76 406 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 EXD2Q9NVH0 621 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 VAPAQ9P0L0 249 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 NTNG1Q9Y2I2 539 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 GMEB1Q9Y692 573 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 SPTA1P02549 2419 aa17.74■□□□□ 0.43
UPF1-209ENST00000600310 LOC100653049A0A140TA62 436 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 PINLYPA6NC86 204 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 BBIP1A8MTZ0 92 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 CLIC1O00299 241 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 FBP2O00757 339 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 KRT34O76011 436 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 UNC5CO95185 931 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 SNX4O95219 450 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 AK1P00568 194 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 CRYABP02511 175 aaKnown RBP17.73■□□□□ 0.43
UPF1-209ENST00000600310 PTGDSP41222 190 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 RFX3P48380 749 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 DNASE1L1P49184 302 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 MLLT10P55197 1068 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 PMP22Q01453 160 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 SNTA1Q13424 505 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 CYLC2Q14093 348 aaPredicted RBP17.73■□□□□ 0.43
UPF1-209ENST00000600310 PRR30Q53SZ7 412 aaPredicted RBP17.73■□□□□ 0.43
UPF1-209ENST00000600310 COQ5Q5HYK3 327 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 COX20Q5RI15 118 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 DCST2Q5T1A1 773 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 CCNJQ5T5M9 372 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 BICRALQ6AI39 1079 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 HEPHL1Q6MZM0 1159 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 SLC30A6Q6NXT4 461 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 FAM180AQ6UWF9 173 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 SNX32Q86XE0 403 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 OR52N2Q8NGI0 321 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 PNPT1Q8TCS8 783 aaKnown RBP17.73■□□□□ 0.43
UPF1-209ENST00000600310 GRHL3Q8TE85 626 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 XAGE5Q8WWM1 108 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 RAB8BQ92930 207 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 BARD1Q99728 777 aaKnown RBP17.73■□□□□ 0.43
UPF1-209ENST00000600310 DOHHQ9BU89 302 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 METTL7AQ9H8H3 244 aa17.73■□□□□ 0.43
UPF1-209ENST00000600310 PRAMEF25A6NGN4 478 aa17.72■□□□□ 0.43
UPF1-209ENST00000600310 HMGN4O00479 90 aa17.72■□□□□ 0.43
UPF1-209ENST00000600310 ICOSLGO75144 302 aa17.72■□□□□ 0.43
UPF1-209ENST00000600310 UTS2O95399 124 aa17.72■□□□□ 0.43
UPF1-209ENST00000600310 FOXO1Q12778 655 aa17.72■□□□□ 0.43
UPF1-209ENST00000600310 NFYCQ13952 458 aa17.72■□□□□ 0.43
UPF1-209ENST00000600310 ARHGAP11BQ3KRB8 267 aa17.72■□□□□ 0.43
UPF1-209ENST00000600310 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.72■□□□□ 0.43
UPF1-209ENST00000600310 ATAD3BQ5T9A4 648 aa17.72■□□□□ 0.43
UPF1-209ENST00000600310 GKAP1Q5VSY0 366 aaPredicted RBP17.72■□□□□ 0.43
UPF1-209ENST00000600310 ZAR1Q86SH2 424 aa17.72■□□□□ 0.43
UPF1-209ENST00000600310 DHDDSQ86SQ9 333 aa17.72■□□□□ 0.43
UPF1-209ENST00000600310 ANKS4BQ8N8V4 417 aa17.72■□□□□ 0.43
UPF1-209ENST00000600310 RP9Q8TA86 221 aaKnown RBP17.72■□□□□ 0.43
UPF1-209ENST00000600310 CPT1CQ8TCG5 803 aa17.72■□□□□ 0.43
UPF1-209ENST00000600310 SDF2Q99470 211 aa17.72■□□□□ 0.43
UPF1-209ENST00000600310 ASF1BQ9NVP2 202 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms