RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 ANKRA2Q9H9E1 313 aa17.05■□□□□ 0.32
PNKP-213ENST00000599543 CALHM2Q9HA72 323 aa17.05■□□□□ 0.32
PNKP-213ENST00000599543 GPR55Q9Y2T6 319 aaPredicted RBP17.05■□□□□ 0.32
PNKP-213ENST00000599543 CCL27Q9Y4X3 112 aa17.05■□□□□ 0.32
PNKP-213ENST00000599543 MED12LQ86YW9 2145 aa17.05■□□□□ 0.32
PNKP-213ENST00000599543 EEF1E1-BLOC1S5C9J1V9 151 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 H0Y3Z8 333 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 H3BQF6 201 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 EEF1E1O43324 174 aaKnown RBP17.04■□□□□ 0.32
PNKP-213ENST00000599543 ERN1O75460 977 aaKnown RBP17.04■□□□□ 0.32
PNKP-213ENST00000599543 JUNP05412 331 aaKnown RBP17.04■□□□□ 0.32
PNKP-213ENST00000599543 CTSSP25774 331 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 IL12BP29460 328 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 OPRM1P35372 400 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 SLC1A6P48664 564 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 IST1P53990 364 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 CORO7P57737 925 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 PSPHP78330 225 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 BST1Q10588 318 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 STX3Q13277 289 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 POMZP3Q6PJE2 187 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 ENPP6Q6UWR7 440 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 Q6ZSR9 355 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 TRIM46Q7Z4K8 759 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 IFNEQ86WN2 208 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 GOLGA6L1Q8N7Z2 621 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 WDSUB1Q8N9V3 476 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 ZPLD1Q8TCW7 415 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 C16orf78Q8WTQ4 265 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 FAM222BQ8WU58 562 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 NINJ1Q92982 152 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 ADOQ96SZ5 270 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 SORT1Q99523 831 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 VIPAS39Q9H9C1 493 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 SLC35C2Q9NQQ7 365 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 RASSF1Q9NS23 344 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 WIF1Q9Y5W5 379 aa17.04■□□□□ 0.32
PNKP-213ENST00000599543 SERTM1A2A2V5 107 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 A6NNC1 897 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 TMEM114B3SHH9 223 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 SLC28A1O00337 649 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 SEC22BO75396 215 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 CHEK2O96017 543 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 FGF4P08620 206 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 ANXA4P09525 319 aaPredicted RBP17.03■□□□□ 0.32
PNKP-213ENST00000599543 CPN1P15169 458 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 TACR1P25103 407 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 MPIP34949 423 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 GSTM5P46439 218 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 AGFG1P52594 562 aaKnown RBP17.03■□□□□ 0.32
PNKP-213ENST00000599543 DGKQP52824 942 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 SRYQ05066 204 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 EFR3AQ14156 821 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 PDCD2Q16342 344 aaPredicted RBP17.03■□□□□ 0.32
PNKP-213ENST00000599543 GALNTL6Q49A17 601 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 KIF18BQ86Y91 864 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 PLCZ1Q86YW0 608 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 FAM9CQ8IZT9 166 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 SLC35A4Q96G79 324 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 C3orf30Q96M34 536 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 VSTM2LQ96N03 204 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 OR2B2Q9GZK3 357 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 FOLH1BQ9HBA9 442 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 LRTM1Q9HBL6 345 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 PNPOQ9NVS9 261 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 TAS2R10Q9NYW0 307 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 EDARQ9UNE0 448 aa17.03■□□□□ 0.32
PNKP-213ENST00000599543 PRRC2AP48634 2157 aaKnown RBP17.02■□□□□ 0.32
PNKP-213ENST00000599543 TUBAL3A6NHL2 446 aa17.02■□□□□ 0.32
PNKP-213ENST00000599543 TMIGD3P0DMS9 266 aaPredicted RBP17.02■□□□□ 0.32
PNKP-213ENST00000599543 CT45A8P0DMV1 189 aa17.02■□□□□ 0.32
PNKP-213ENST00000599543 CT45A9P0DMV2 189 aa17.02■□□□□ 0.32
PNKP-213ENST00000599543 SERPINB5P36952 375 aa17.02■□□□□ 0.32
PNKP-213ENST00000599543 RPL38P63173 70 aaKnown RBP17.02■□□□□ 0.32
PNKP-213ENST00000599543 CT45A2Q5DJT8 189 aa17.02■□□□□ 0.32
PNKP-213ENST00000599543 FBXW10Q5XX13 1052 aa17.02■□□□□ 0.32
PNKP-213ENST00000599543 GALNT18Q6P9A2 607 aa17.02■□□□□ 0.32
PNKP-213ENST00000599543 AAGABQ6PD74 315 aa17.02■□□□□ 0.32
PNKP-213ENST00000599543 LARP4Q71RC2 724 aaKnown RBP eCLIP17.02■□□□□ 0.32
PNKP-213ENST00000599543 TRIM42Q8IWZ5 723 aa17.02■□□□□ 0.32
PNKP-213ENST00000599543 C9orf106Q8NAJ2 232 aa17.02■□□□□ 0.32
PNKP-213ENST00000599543 GOT1L1Q8NHS2 421 aaPredicted RBP17.02■□□□□ 0.32
PNKP-213ENST00000599543 BBS4Q96RK4 519 aa17.02■□□□□ 0.32
PNKP-213ENST00000599543 TUBA1CQ9BQE3 449 aa17.02■□□□□ 0.32
PNKP-213ENST00000599543 TAS2R9Q9NYW1 312 aa17.02■□□□□ 0.32
PNKP-213ENST00000599543 ST6GALNAC2Q9UJ37 374 aa17.02■□□□□ 0.32
PNKP-213ENST00000599543 DKKL1Q9UK85 242 aa17.02■□□□□ 0.32
PNKP-213ENST00000599543 CBLCQ9ULV8 474 aa17.02■□□□□ 0.32
PNKP-213ENST00000599543 OR10H1Q9Y4A9 318 aa17.02■□□□□ 0.32
PNKP-213ENST00000599543 NF1P21359 2839 aa17.02■□□□□ 0.31
PNKP-213ENST00000599543 RGS14O43566 566 aa17.01■□□□□ 0.31
PNKP-213ENST00000599543 PLOD3O60568 738 aa17.01■□□□□ 0.31
PNKP-213ENST00000599543 PEX11AO75192 247 aa17.01■□□□□ 0.31
PNKP-213ENST00000599543 NME6O75414 186 aaPredicted RBP17.01■□□□□ 0.31
PNKP-213ENST00000599543 RSL1D1O76021 490 aaKnown RBP17.01■□□□□ 0.31
PNKP-213ENST00000599543 IL18BPO95998 194 aa17.01■□□□□ 0.31
PNKP-213ENST00000599543 DDCP20711 480 aa17.01■□□□□ 0.31
PNKP-213ENST00000599543 SRD5A2P31213 254 aa17.01■□□□□ 0.31
PNKP-213ENST00000599543 MRPS22P82650 360 aaKnown RBP17.01■□□□□ 0.31
PNKP-213ENST00000599543 SORDQ00796 357 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms