RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 OR5P2Q8WZ92 322 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 JADE3Q92613 823 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 MOAP1Q96BY2 351 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 MS4A4EQ96PG1 132 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 TTYH2Q9BSA4 534 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 LMF2Q9BU23 707 aaKnown RBP12.91□□□□□ -0.34
LIG1-218ENST00000599322 TBL1XR1Q9BZK7 514 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 GALNT9Q9HCQ5 603 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 SERHLQ9NQF3 203 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 ZCCHC3Q9NUD5 404 aaKnown RBP12.91□□□□□ -0.34
LIG1-218ENST00000599322 ARGLU1Q9NWB6 273 aaPredicted RBP12.91□□□□□ -0.34
LIG1-218ENST00000599322 TNFRSF10DQ9UBN6 386 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 FAF1Q9UNN5 650 aaPredicted RBP12.91□□□□□ -0.34
LIG1-218ENST00000599322 RNF6Q9Y252 685 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 CSMD1Q96PZ7 3565 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 TMEM120BA0PK00 339 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 HSPB2A8KAH6 182 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 SLCO1B7G3V0H7 640 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 ITM2AO43736 263 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 SCO2O43819 266 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 IL33O95760 270 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 DHRS4L1P0CG22 281 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 CYP4B1P13584 511 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 SRD5A2P31213 254 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 SOX18P35713 384 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 HSPB2Q16082 182 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 PRSS53Q2L4Q9 553 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 PGS1Q32NB8 556 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 TNFAIP8L3Q5GJ75 292 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 EMC4Q5J8M3 183 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 WIPI1Q5MNZ9 446 aaPredicted RBP12.9□□□□□ -0.34
LIG1-218ENST00000599322 NCCRP1Q6ZVX7 275 aaPredicted RBP12.9□□□□□ -0.34
LIG1-218ENST00000599322 IFNEQ86WN2 208 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 ULK2Q8IYT8 1036 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 FAM83FQ8NEG4 500 aaPredicted RBP12.9□□□□□ -0.34
LIG1-218ENST00000599322 OR4N2Q8NGD1 307 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 OR56A1Q8NGH5 318 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 LILRB4Q8NHJ6 448 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 MGARPQ8TDB4 240 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 ZBTB9Q96C00 473 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 PPP1R36Q96LQ0 422 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 C3orf30Q96M34 536 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 TIMP4Q99727 224 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 G6PC3Q9BUM1 346 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 DPY30Q9C005 99 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 BHLHE41Q9C0J9 482 aaPredicted RBP12.9□□□□□ -0.34
LIG1-218ENST00000599322 UBQLN3Q9H347 655 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 SLC24A3Q9HC58 644 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 NEUROD4Q9HD90 331 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 FAM120CQ9NX05 1096 aaKnown RBP12.9□□□□□ -0.34
LIG1-218ENST00000599322 TAS2R10Q9NYW0 307 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 SPRR3Q9UBC9 169 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 STOML1Q9UBI4 398 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 SLC6A5Q9Y345 797 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 APCP25054 2843 aa12.9□□□□□ -0.34
LIG1-218ENST00000599322 EML6Q6ZMW3 1958 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 NCOA6Q14686 2063 aaPredicted RBP12.89□□□□□ -0.35
LIG1-218ENST00000599322 NINQ8N4C6 2090 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 TRPC5OSA6NMA1 111 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 FAM90A27PA6NNH2 459 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 NME6O75414 186 aaPredicted RBP12.89□□□□□ -0.35
LIG1-218ENST00000599322 IL2RAP01589 272 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 GLI4P10075 376 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 PRF1P14222 555 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 LBPP18428 481 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 ATP6V1C1P21283 382 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 EVI2BP34910 448 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 FRKP42685 505 aaPredicted RBP12.89□□□□□ -0.35
LIG1-218ENST00000599322 CCT3P49368 545 aaKnown RBP12.89□□□□□ -0.35
LIG1-218ENST00000599322 SLC18A1P54219 525 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 DSCR4P56555 118 aaPredicted RBP12.89□□□□□ -0.35
LIG1-218ENST00000599322 CLDN8P56748 225 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 MAGOHP61326 146 aaKnown RBP12.89□□□□□ -0.35
LIG1-218ENST00000599322 C17orf67Q0P5P2 114 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 PTGR1Q14914 329 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 EIPR1Q53HC9 387 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 ZNF385BQ569K4 471 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 NHSL2Q5HYW2 709 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 BEND6Q5SZJ8 279 aaPredicted RBP12.89□□□□□ -0.35
LIG1-218ENST00000599322 RIPPLY2Q5TAB7 128 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 VASNQ6EMK4 673 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 DESI1Q6ICB0 168 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 LACC1Q8IV20 430 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 LRRC34Q8IZ02 419 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 COX18Q8N8Q8 333 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 OR7A2PQ8NGA2 310 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 RAB3IL1Q8TBN0 382 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 RMND5BQ96G75 393 aaPredicted RBP12.89□□□□□ -0.35
LIG1-218ENST00000599322 SFXN2Q96NB2 322 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 DUSP26Q9BV47 211 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 AKTIPQ9H8T0 292 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 THAP1Q9NVV9 213 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 ASIC5Q9NY37 505 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 GIMAP2Q9UG22 337 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 MRPS18CQ9Y3D5 142 aaKnown RBP12.89□□□□□ -0.35
LIG1-218ENST00000599322 HRH3Q9Y5N1 445 aa12.89□□□□□ -0.35
LIG1-218ENST00000599322 PCNX1Q96RV3 2341 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 H0Y3Z8 333 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 DVL2O14641 736 aa12.88□□□□□ -0.35
LIG1-218ENST00000599322 NKX2-2O95096 273 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms