RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 TIGD3Q6B0B8 471 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 ZCCHC12Q6PEW1 402 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 DOLPP1Q86YN1 238 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 CLECL1Q8IZS7 167 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 SLC16A11Q8NCK7 471 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 OR8J2Q8NGG1 315 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 OR56A1Q8NGH5 318 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 OR1J4Q8NGS1 313 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 SFXN5Q8TD22 340 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 ACTRT2Q8TDY3 377 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 RNF138Q8WVD3 245 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 JADE3Q92613 823 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 TESCQ96BS2 214 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 RMND5BQ96G75 393 aaPredicted RBP12.66□□□□□ -0.38
UPF1-205ENST00000598209 C16orf58Q96GQ5 468 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 CCDC120Q96HB5 630 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 PHF12Q96QT6 1004 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 YIPF4Q9BSR8 244 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 SLC6A15Q9H2J7 730 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 ACKR4Q9NPB9 350 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 ZNF446Q9NWS9 450 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 C15orf41Q9Y2V0 281 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 WIF1Q9Y5W5 379 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 GPR45Q9Y5Y3 372 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 USH1CQ9Y6N9 552 aa12.66□□□□□ -0.38
UPF1-205ENST00000598209 SPTBN1Q01082 2364 aaKnown RBP12.65□□□□□ -0.38
UPF1-205ENST00000598209 ARHGAP21Q5T5U3 1957 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 COL12A1Q99715 3063 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 OR14I1A6ND48 311 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 E9PBE3 544 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 RNASET2O00584 256 aaKnown RBP12.65□□□□□ -0.38
UPF1-205ENST00000598209 DIAPH2O60879 1101 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 TRAPPC6AO75865 159 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 IGKV1D-16P01601 117 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 HMGN2P05204 90 aaKnown RBP12.65□□□□□ -0.38
UPF1-205ENST00000598209 ALOX5P09917 674 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 PTPN6P29350 595 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 EVI2BP34910 448 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 SOAT1P35610 550 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 TRPC1P48995 793 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 UFM1P61960 85 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 PHC1P78364 1004 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 TP53BP2Q13625 1128 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 LASP1Q14847 261 aaKnown RBP12.65□□□□□ -0.38
UPF1-205ENST00000598209 TOMM20Q15388 145 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 DUSP5Q16690 384 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 DPY19L1Q2PZI1 675 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 SPANXN4Q5MJ08 99 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 EXOSC6Q5RKV6 272 aaKnown RBP12.65□□□□□ -0.38
UPF1-205ENST00000598209 MTFR2Q6P444 385 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 C3P1Q6ZMU1 363 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 OR5AK3PQ8NH89 298 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 MOAP1Q96BY2 351 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 OTUB1Q96FW1 271 aaPredicted RBP12.65□□□□□ -0.38
UPF1-205ENST00000598209 TEX37Q96LM6 180 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 OR52B2Q96RD2 323 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 UBQLN3Q9H347 655 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 FLRT3Q9NZU0 649 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 SPRR3Q9UBC9 169 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 MEMO1Q9Y316 297 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 HRH3Q9Y5N1 445 aa12.65□□□□□ -0.38
UPF1-205ENST00000598209 PRSS51A0A1B0GVH4 220 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 BCKDKO14874 412 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 SCO2O43819 266 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 SCN2BO60939 215 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 HPNP05981 417 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 IDO1P14902 403 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 ENDOUP21128 410 aaKnown RBP12.64□□□□□ -0.39
UPF1-205ENST00000598209 IL12AP29459 219 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 S100A3P33764 101 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 GAS1P54826 345 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 FAM174BQ3ZCQ3 159 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 EMC4Q5J8M3 183 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 ANXA8L1Q5VT79 327 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 CDC73Q6P1J9 531 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 EPGNQ6UW88 154 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 ANKRD46Q86W74 232 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 EID3Q8N140 333 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 COX18Q8N8Q8 333 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 WDSUB1Q8N9V3 476 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 VPS37AQ8NEZ2 397 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 OR4A15Q8NGL6 344 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 NEIL3Q8TAT5 605 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 CKAP2Q8WWK9 683 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 SARAFQ96BY9 339 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 CHMP6Q96FZ7 201 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 MARK4Q96L34 752 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 MAGEB18Q96M61 343 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 STACQ99469 402 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 ACTRT3Q9BYD9 372 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 SERHLQ9NQF3 203 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 TNFRSF10DQ9UBN6 386 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 PCDHGB4Q9UN71 923 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 FAF1Q9UNN5 650 aaPredicted RBP12.64□□□□□ -0.39
UPF1-205ENST00000598209 ABCG2Q9UNQ0 655 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 MED12Q93074 2177 aa12.64□□□□□ -0.39
UPF1-205ENST00000598209 SPTAN1Q13813 2472 aaKnown RBP12.64□□□□□ -0.39
UPF1-205ENST00000598209 DOPEY1Q5JWR5 2465 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 UQCRHLA0A096LP55 91 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 A1L4Q6 167 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms