RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 SLC6A19Q695T7 634 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 CDC73Q6P1J9 531 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 ERICH5Q6P6B1 374 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 KIRREL2Q6UWL6 708 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 HSDL2Q6YN16 418 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 C16orf62Q7Z3J2 963 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 SERPINA11Q86U17 422 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 IFNEQ86WN2 208 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 ULK2Q8IYT8 1036 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 LGI4Q8N135 537 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 HORMAD2Q8N7B1 307 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 RNF148Q8N7C7 305 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 OR11G2Q8NGC1 345 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 C16orf52Q8NHV5 167 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 ADAMTS15Q8TE58 950 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 CCDC124Q96CT7 223 aaKnown RBP11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 GIMAP5Q96F15 307 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 REXO5Q96IC2 774 aaKnown RBP11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 GAL3ST4Q96RP7 486 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 WDR77Q9BQA1 342 aaPredicted RBP11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 MESP1Q9BRJ9 268 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 NUDT9Q9BW91 350 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 CADM1Q9BY67 442 aaKnown RBP11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 PIF1Q9H611 641 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 ZNF160Q9HCG1 818 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 EXD2Q9NVH0 621 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 P2RX2Q9UBL9 471 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 FBXL4Q9UKA2 621 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 PCDHGB3Q9Y5G1 929 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 FBN1P35555 2871 aaKnown RBP11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 TRBV11-1A0A0K0K1C0 115 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 CDC14CA4D256 554 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 CFAP73A6NFT4 308 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 C5orf58C9J3I9 102 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 GMNNO75496 209 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 CIB2O75838 187 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 ACP2P11117 423 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 ICAM2P13598 275 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 HSD17B1P14061 328 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 TCN1P20061 433 aaPredicted RBP11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 ME2P23368 584 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 SOX18P35713 384 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 EMDP50402 254 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 MVDP53602 400 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 DCAF7P61962 342 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 BNIP2Q12982 314 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 ATP1A4Q13733 1029 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 MYBPC3Q14896 1274 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 PIGGQ5H8A4 983 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 PLAG1Q6DJT9 500 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 SLC30A8Q8IWU4 369 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 FBXW8Q8N3Y1 598 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 ZNF321PQ8N8H1 164 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 ZNF615Q8N8J6 731 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 COX18Q8N8Q8 333 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 C11orf65Q8NCR3 313 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 SIMC1Q8NDZ2 872 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 NFAM1Q8NET5 270 aaPredicted RBP11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 OR5D16Q8NGK9 328 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 M1APQ8TC57 530 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 GPR151Q8TDV0 419 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 XAGE5Q8WWM1 108 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 PNPLA2Q96AD5 504 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 OTUB1Q96FW1 271 aaPredicted RBP11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 C16orf58Q96GQ5 468 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 CLPTM1LQ96KA5 538 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 OR7D2Q96RA2 312 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 STACQ99469 402 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 BARD1Q99728 777 aaKnown RBP11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 LMF2Q9BU23 707 aaKnown RBP11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 ITPAQ9BY32 194 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 Q9N2J8 555 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 DUSP22Q9NRW4 184 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 ASF1BQ9NVP2 202 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 P4HTMQ9NXG6 502 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 SUCOQ9UBS9 1254 aaKnown RBP11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 PACSIN3Q9UKS6 424 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 PPIEQ9UNP9 301 aaKnown RBP11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 ANGPT4Q9Y264 503 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 OR10H1Q9Y4A9 318 aa11.14□□□□□ -0.63
SHKBP1-213ENST00000597325 ACANP16112 2415 aa11.13□□□□□ -0.63
SHKBP1-213ENST00000597325 C2orf92A0A1B0GVN3 265 aa11.13□□□□□ -0.63
SHKBP1-213ENST00000597325 ELOVL7A1L3X0 281 aa11.13□□□□□ -0.63
SHKBP1-213ENST00000597325 PRORSD1PA6NEY8 169 aa11.13□□□□□ -0.63
SHKBP1-213ENST00000597325 FRG2CA6NGY1 282 aa11.13□□□□□ -0.63
SHKBP1-213ENST00000597325 HMGN4O00479 90 aa11.13□□□□□ -0.63
SHKBP1-213ENST00000597325 ZG16O60844 167 aa11.13□□□□□ -0.63
SHKBP1-213ENST00000597325 AK1P00568 194 aa11.13□□□□□ -0.63
SHKBP1-213ENST00000597325 C1QCP02747 245 aa11.13□□□□□ -0.63
SHKBP1-213ENST00000597325 CLPSP04118 112 aa11.13□□□□□ -0.63
SHKBP1-213ENST00000597325 OR12D1P0DN82 309 aa11.13□□□□□ -0.63
SHKBP1-213ENST00000597325 ARAFP10398 606 aa11.13□□□□□ -0.63
SHKBP1-213ENST00000597325 NR2F1P10589 423 aa11.13□□□□□ -0.63
SHKBP1-213ENST00000597325 BMP2P12643 396 aa11.13□□□□□ -0.63
SHKBP1-213ENST00000597325 GABRA3P34903 492 aa11.13□□□□□ -0.63
SHKBP1-213ENST00000597325 PCGF2P35227 344 aa11.13□□□□□ -0.63
SHKBP1-213ENST00000597325 KCNJ2P63252 427 aa11.13□□□□□ -0.63
SHKBP1-213ENST00000597325 PSPHP78330 225 aa11.13□□□□□ -0.63
SHKBP1-213ENST00000597325 POU6F2P78424 691 aaPredicted RBP11.13□□□□□ -0.63
SHKBP1-213ENST00000597325 RBBP4Q09028 425 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms