RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 TRAPPC6AO75865 159 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 AGFG2O95081 481 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 GSNP06396 782 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 CELA3AP09093 270 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 IFI6P09912 130 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 ABOP16442 354 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 MATN1P21941 496 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 UQCRC2P22695 453 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 CHI3L1P36222 383 aaPredicted RBP10.15□□□□□ -0.78
LIG1-211ENST00000596457 TRPC1P48995 793 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 POLR2JP52435 117 aaKnown RBP10.15□□□□□ -0.78
LIG1-211ENST00000596457 PSMD4P55036 377 aaKnown RBP10.15□□□□□ -0.78
LIG1-211ENST00000596457 RPS26P62854 115 aaKnown RBP10.15□□□□□ -0.78
LIG1-211ENST00000596457 POU6F2P78424 691 aaPredicted RBP10.15□□□□□ -0.78
LIG1-211ENST00000596457 MRPS22P82650 360 aaKnown RBP10.15□□□□□ -0.78
LIG1-211ENST00000596457 SLC10A1Q14973 349 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 DUSP5Q16690 384 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 DPY19L1Q2PZI1 675 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 CMPK2Q5EBM0 449 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 TBCELQ5QJ74 424 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 CCNJQ5T5M9 372 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 C1QL3Q5VWW1 255 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 SLC30A6Q6NXT4 461 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 RGS9BPQ6ZS82 235 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 ZNF621Q6ZSS3 439 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 COX18Q8N8Q8 333 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 OR9I1Q8NGQ6 314 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 OR1J4Q8NGS1 313 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 SFXN5Q8TD22 340 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 CDS1Q92903 461 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 MOAP1Q96BY2 351 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 SLC35A4Q96G79 324 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 SLC35G5Q96KT7 338 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 GNRHR2Q96P88 292 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 PANX1Q96RD7 426 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 SECISBP2Q96T21 854 aaKnown RBP10.15□□□□□ -0.78
LIG1-211ENST00000596457 INPP5KQ9BT40 448 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 ACTRT3Q9BYD9 372 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 NEUROD4Q9HD90 331 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 RYDENQ9NUL5 291 aaKnown RBP10.15□□□□□ -0.78
LIG1-211ENST00000596457 FGFR1OP2Q9NVK5 253 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 FLRT3Q9NZU0 649 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 ZIM2Q9NZV7 527 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 NTMQ9P121 344 aa10.15□□□□□ -0.78
LIG1-211ENST00000596457 CNTRLQ7Z7A1 2325 aa10.15□□□□□ -0.79
LIG1-211ENST00000596457 NBASA2RRP1 2371 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 ANKRD33BA6NCL7 494 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 GMFGO60234 142 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 SCN2BO60939 215 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 ABCB7O75027 752 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 SEMA7AO75326 666 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 TRIM3O75382 744 aaPredicted RBP10.14□□□□□ -0.79
LIG1-211ENST00000596457 GLSO94925 669 aaPredicted RBP10.14□□□□□ -0.79
LIG1-211ENST00000596457 NKX2-2O95096 273 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 SNX4O95219 450 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 UTS2O95399 124 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 ANP32DO95626 131 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 IL33O95760 270 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 IGKV1D-16P01601 117 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 PGRP06401 933 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 TROVE2P10155 538 aaKnown RBP eCLIP10.14□□□□□ -0.79
LIG1-211ENST00000596457 TCEA1P23193 301 aaKnown RBP10.14□□□□□ -0.79
LIG1-211ENST00000596457 PTGDSP41222 190 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 CLK3P49761 638 aaKnown RBP10.14□□□□□ -0.79
LIG1-211ENST00000596457 PSPHP78330 225 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 FOXO1Q12778 655 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 STX5Q13190 355 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 OR5M10Q6IEU7 315 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 CDC73Q6P1J9 531 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 ZCCHC12Q6PEW1 402 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 BHLHB9Q6PI77 547 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 FJX1Q86VR8 437 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 FAM109AQ8N4B1 249 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 GLB1L3Q8NCI6 653 aaPredicted RBP10.14□□□□□ -0.79
LIG1-211ENST00000596457 OR5D16Q8NGK9 328 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 PSMA8Q8TAA3 256 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 SSC4DQ8WTU2 575 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 VPS33AQ96AX1 596 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 PSMG3-AS1Q96PY0 264 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 OR7D2Q96RA2 312 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 SLC35A5Q9BS91 424 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 FBXO34Q9NWN3 711 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 FAM120CQ9NX05 1096 aaKnown RBP10.14□□□□□ -0.79
LIG1-211ENST00000596457 GIN1Q9NXP7 522 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 TNFRSF10DQ9UBN6 386 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 B4GALT7Q9UBV7 327 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 BTNL2Q9UIR0 455 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 LIPGQ9Y5X9 500 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 KCNE3Q9Y6H6 103 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 NBPF19A0A087WUL8 3843 aa10.14□□□□□ -0.79
LIG1-211ENST00000596457 USP9YO00507 2555 aaPredicted RBP10.14□□□□□ -0.79
LIG1-211ENST00000596457 NPIPA5A0A0B4J1W7 369 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 FAM234BA2RU67 622 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 CCDC154A6NI56 674 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 LRRC3CA6NJW4 275 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 NPIPA2E9PIF3 369 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 NPIPA7E9PJI5 369 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 NPIPA3F8WFD2 350 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 NR5A2O00482 541 aa10.13□□□□□ -0.79
LIG1-211ENST00000596457 LRRTM2O43300 516 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms