RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 SERPINB8P50452 374 aa8.96□□□□□ -0.98
LIG1-209ENST00000596104 EEFSECP57772 596 aaKnown RBP8.96□□□□□ -0.98
LIG1-209ENST00000596104 PSPHP78330 225 aa8.96□□□□□ -0.98
LIG1-209ENST00000596104 PSG6Q00889 435 aa8.96□□□□□ -0.98
LIG1-209ENST00000596104 OCRLQ01968 901 aa8.96□□□□□ -0.98
LIG1-209ENST00000596104 CAV1Q03135 178 aa8.96□□□□□ -0.98
LIG1-209ENST00000596104 PON3Q15166 354 aa8.96□□□□□ -0.98
LIG1-209ENST00000596104 BEX5Q5H9J7 111 aa8.96□□□□□ -0.98
LIG1-209ENST00000596104 RAET1LQ5VY80 246 aa8.96□□□□□ -0.98
LIG1-209ENST00000596104 ZNF704Q6ZNC4 412 aaPredicted RBP8.96□□□□□ -0.98
LIG1-209ENST00000596104 SH2D5Q6ZV89 423 aa8.96□□□□□ -0.98
LIG1-209ENST00000596104 FAM214BQ7L5A3 538 aa8.96□□□□□ -0.98
LIG1-209ENST00000596104 SLC44A2Q8IWA5 706 aaPredicted RBP8.96□□□□□ -0.98
LIG1-209ENST00000596104 METTL25Q8N6Q8 603 aa8.96□□□□□ -0.98
LIG1-209ENST00000596104 OR5M1Q8NGP8 315 aa8.96□□□□□ -0.98
LIG1-209ENST00000596104 ZNF483Q8TF39 744 aaPredicted RBP8.96□□□□□ -0.98
LIG1-209ENST00000596104 TMEM171Q8WVE6 324 aa8.96□□□□□ -0.98
LIG1-209ENST00000596104 EFHD2Q96C19 240 aaPredicted RBP8.96□□□□□ -0.98
LIG1-209ENST00000596104 HBEGFQ99075 208 aa8.96□□□□□ -0.98
LIG1-209ENST00000596104 TMEM204Q9BSN7 226 aa8.96□□□□□ -0.98
LIG1-209ENST00000596104 VPS11Q9H270 941 aa8.96□□□□□ -0.98
LIG1-209ENST00000596104 FOLH1BQ9HBA9 442 aa8.96□□□□□ -0.98
LIG1-209ENST00000596104 FLRT3Q9NZU0 649 aa8.96□□□□□ -0.98
LIG1-209ENST00000596104 PPP4R1LQ9P1A2 415 aa8.96□□□□□ -0.98
LIG1-209ENST00000596104 XPR1Q9UBH6 696 aa8.96□□□□□ -0.98
LIG1-209ENST00000596104 PROCRQ9UNN8 238 aa8.96□□□□□ -0.98
LIG1-209ENST00000596104 RAI1Q7Z5J4 1906 aaPredicted RBP8.95□□□□□ -0.98
LIG1-209ENST00000596104 SONP18583 2426 aaKnown RBP8.95□□□□□ -0.98
LIG1-209ENST00000596104 USF3Q68DE3 2245 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 LINC01387J3KSC0 135 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 OTCP00480 354 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 IL3P08700 152 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 NID1P14543 1247 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 CHN1P15882 459 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 TSPAN8P19075 237 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 SLC6A8P48029 635 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 CDH13P55290 713 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 RAE1P78406 368 aaKnown RBP8.95□□□□□ -0.98
LIG1-209ENST00000596104 MRPS22P82650 360 aaKnown RBP8.95□□□□□ -0.98
LIG1-209ENST00000596104 C2orf54Q08AI8 447 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 TNK1Q13470 666 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 GANABQ14697 944 aaKnown RBP8.95□□□□□ -0.98
LIG1-209ENST00000596104 ERCC6LQ2NKX8 1250 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 TMEM44Q2T9K0 475 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 TCHHL1Q5QJ38 904 aaPredicted RBP8.95□□□□□ -0.98
LIG1-209ENST00000596104 UBAP2Q5T6F2 1119 aaKnown RBP8.95□□□□□ -0.98
LIG1-209ENST00000596104 STAC2Q6ZMT1 411 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 GGNQ86UU5 652 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 SAMD14Q8IZD0 417 aaPredicted RBP8.95□□□□□ -0.98
LIG1-209ENST00000596104 ZNF611Q8N823 705 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 OR7G2Q8NG99 324 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 NANOS1Q8WY41 292 aaKnown RBP8.95□□□□□ -0.98
LIG1-209ENST00000596104 C1GALT1C1Q96EU7 318 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 C1QTNF3Q9BXJ4 246 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 KLHL4Q9C0H6 718 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 CXorf56Q9H5V9 222 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 PFDN4Q9NQP4 134 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 PLSCR4Q9NRQ2 329 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 NMRK1Q9NWW6 199 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 MED11Q9P086 117 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 VPS29Q9UBQ0 182 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 MCM8Q9UJA3 840 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 TMCO1Q9UM00 188 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 SNX6Q9UNH7 406 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 ABCG2Q9UNQ0 655 aa8.95□□□□□ -0.98
LIG1-209ENST00000596104 H3BML4 177 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 HS3ST1O14792 307 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 SMIM24O75264 130 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 OR4F21O95013 312 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 ESRRBO95718 433 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 SBK3P0C264 359 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 HSD3B1P14060 373 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 PPP3CBP16298 524 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 IL11P20809 199 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 HSD3B2P26439 372 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 NR1H2P55055 460 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 ATP5J2P56134 94 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 STX5Q13190 355 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 UAP1Q16222 522 aaPredicted RBP8.94□□□□□ -0.98
LIG1-209ENST00000596104 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.94□□□□□ -0.98
LIG1-209ENST00000596104 EXOC3L2Q2M3D2 409 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 GLYR1Q49A26 553 aaPredicted RBP8.94□□□□□ -0.98
LIG1-209ENST00000596104 HEPHL1Q6MZM0 1159 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 TMEM151AQ8N4L1 468 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 OR6K3Q8NGY3 331 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 UHMK1Q8TAS1 419 aaKnown RBP8.94□□□□□ -0.98
LIG1-209ENST00000596104 GFM2Q969S9 779 aaKnown RBP8.94□□□□□ -0.98
LIG1-209ENST00000596104 EXOSC8Q96B26 276 aaKnown RBP8.94□□□□□ -0.98
LIG1-209ENST00000596104 MTBPQ96DY7 904 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 C11orf24Q96F05 449 aaPredicted RBP8.94□□□□□ -0.98
LIG1-209ENST00000596104 STMN4Q9H169 189 aaPredicted RBP8.94□□□□□ -0.98
LIG1-209ENST00000596104 SLC35C2Q9NQQ7 365 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 FAM120CQ9NX05 1096 aaKnown RBP8.94□□□□□ -0.98
LIG1-209ENST00000596104 TAS2R9Q9NYW1 312 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 UTP11Q9Y3A2 253 aaKnown RBP8.94□□□□□ -0.98
LIG1-209ENST00000596104 OR10H1Q9Y4A9 318 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 AP4B1Q9Y6B7 739 aa8.94□□□□□ -0.98
LIG1-209ENST00000596104 A0A087WV62 115 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 IGLV3-32A0A0A0MS00 114 aa8.93□□□□□ -0.98
LIG1-209ENST00000596104 A8MT66 165 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms