RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 TBX6O95947 436 aaPredicted RBP11.86□□□□□ -0.51
SCAF1-202ENST00000595242 ABCB1P08183 1280 aaPredicted RBP11.86□□□□□ -0.51
SCAF1-202ENST00000595242 NCK1P16333 377 aa11.86□□□□□ -0.51
SCAF1-202ENST00000595242 GPX2P18283 190 aa11.86□□□□□ -0.51
SCAF1-202ENST00000595242 PPIBP23284 216 aaKnown RBP11.86□□□□□ -0.51
SCAF1-202ENST00000595242 FASP25445 335 aa11.86□□□□□ -0.51
SCAF1-202ENST00000595242 CDKN2CP42773 168 aa11.86□□□□□ -0.51
SCAF1-202ENST00000595242 KIR2DL3P43628 341 aa11.86□□□□□ -0.51
SCAF1-202ENST00000595242 ABATP80404 500 aa11.86□□□□□ -0.51
SCAF1-202ENST00000595242 TSTA3Q13630 321 aaPredicted RBP11.86□□□□□ -0.51
SCAF1-202ENST00000595242 ATP6AP1Q15904 470 aa11.86□□□□□ -0.51
SCAF1-202ENST00000595242 CYP51A1Q16850 503 aa11.86□□□□□ -0.51
SCAF1-202ENST00000595242 PGS1Q32NB8 556 aa11.86□□□□□ -0.51
SCAF1-202ENST00000595242 FAM71E1Q6IPT2 247 aa11.86□□□□□ -0.51
SCAF1-202ENST00000595242 DNAJC14Q6Y2X3 702 aaPredicted RBP11.86□□□□□ -0.51
SCAF1-202ENST00000595242 R3HCC1LQ7Z5L2 792 aaKnown RBP11.86□□□□□ -0.51
SCAF1-202ENST00000595242 SERPINA11Q86U17 422 aa11.86□□□□□ -0.51
SCAF1-202ENST00000595242 KRTAP1-3Q8IUG1 177 aa11.86□□□□□ -0.51
SCAF1-202ENST00000595242 ZNF740Q8NDX6 193 aa11.86□□□□□ -0.51
SCAF1-202ENST00000595242 OR2A1Q8NGT9 310 aa11.86□□□□□ -0.51
SCAF1-202ENST00000595242 OR10A6Q8NH74 314 aa11.86□□□□□ -0.51
SCAF1-202ENST00000595242 MMABQ96EY8 250 aaPredicted RBP11.86□□□□□ -0.51
SCAF1-202ENST00000595242 REXO5Q96IC2 774 aaKnown RBP11.86□□□□□ -0.51
SCAF1-202ENST00000595242 ZNF597Q96LX8 424 aa11.86□□□□□ -0.51
SCAF1-202ENST00000595242 PRPF18Q99633 342 aaKnown RBP11.86□□□□□ -0.51
SCAF1-202ENST00000595242 THUMPD3Q9BV44 507 aaKnown RBP11.86□□□□□ -0.51
SCAF1-202ENST00000595242 ZNF717Q9BY31 904 aaPredicted RBP11.86□□□□□ -0.51
SCAF1-202ENST00000595242 REEP4Q9H6H4 257 aa11.86□□□□□ -0.51
SCAF1-202ENST00000595242 TRBC2A0A5B9 178 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 C1orf226A1L170 272 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 MAGEA13PA6NCF6 341 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 TFECO14948 347 aaPredicted RBP11.85□□□□□ -0.51
SCAF1-202ENST00000595242 AKAP10O43572 662 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 NME2P1O60361 137 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 SLC25A12O75746 678 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 CCNDBP1O95273 360 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 LAMP1P11279 417 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 NME2P22392 152 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 ARFIP1P53367 373 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 PRDX1Q06830 199 aaKnown RBP11.85□□□□□ -0.51
SCAF1-202ENST00000595242 MED21Q13503 144 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 SYT16Q17RD7 645 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 HKDC1Q2TB90 917 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 CPTPQ5TA50 214 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 DEPDC1Q5TB30 811 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 KHDRBS2Q5VWX1 349 aaKnown RBP11.85□□□□□ -0.51
SCAF1-202ENST00000595242 PPP4R4Q6NUP7 873 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 ERICH5Q6P6B1 374 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 LANCL3Q6ZV70 420 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 CPEB2Q7Z5Q1 589 aaKnown RBP11.85□□□□□ -0.51
SCAF1-202ENST00000595242 ZC3H7AQ8IWR0 971 aaKnown RBP11.85□□□□□ -0.51
SCAF1-202ENST00000595242 ANKRD53Q8N9V6 530 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 VPS37AQ8NEZ2 397 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 TTLQ8NG68 377 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 OR10Q1Q8NGQ4 319 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 FAM110BQ8TC76 370 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 C16orf78Q8WTQ4 265 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 EME1Q96AY2 570 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 FAM120BQ96EK7 910 aaKnown RBP11.85□□□□□ -0.51
SCAF1-202ENST00000595242 MVB12AQ96EY5 273 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 CENPNQ96H22 339 aaPredicted RBP11.85□□□□□ -0.51
SCAF1-202ENST00000595242 OR51B5Q9H339 312 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 Q9H521 79 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 MAGIXQ9H6Y5 334 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 ATAD3AQ9NVI7 634 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 AHSPQ9NZD4 102 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 CRIM1Q9NZV1 1036 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 ZNF639Q9UID6 485 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 ADAM29Q9UKF5 820 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 CORO2BQ9UQ03 480 aa11.85□□□□□ -0.51
SCAF1-202ENST00000595242 GNG14A0A1W2PPG7 69 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 ANKDD1BA6NHY2 528 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 A6NNC1 897 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 EVPLLA8MZ36 301 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 CXCR6O00574 342 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 HS6ST1O60243 411 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 GMNNO75496 209 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 CLEC3AO75596 197 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 FKBP9O95302 570 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 B3GALT4O96024 378 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 TGFB1P01137 390 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 RAP2AP10114 183 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 PSMB5P28074 263 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 TPP2P29144 1249 aaPredicted RBP11.84□□□□□ -0.51
SCAF1-202ENST00000595242 BSGP35613 385 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 EMP3P54852 163 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 PLIN5Q00G26 463 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 MEF2AQ02078 507 aaPredicted RBP11.84□□□□□ -0.51
SCAF1-202ENST00000595242 PRTGQ2VWP7 1150 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 ZNF385BQ569K4 471 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 EMC4Q5J8M3 183 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 RNF44Q7L0R7 432 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 ZNF551Q7Z340 670 aaPredicted RBP11.84□□□□□ -0.51
SCAF1-202ENST00000595242 AMIGO2Q86SJ2 522 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 ANKRD46Q86W74 232 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 EPHX4Q8IUS5 362 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 NATD1Q8N6N6 113 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 OR5M3Q8NGP4 307 aa11.84□□□□□ -0.51
SCAF1-202ENST00000595242 GFM2Q969S9 779 aaKnown RBP11.84□□□□□ -0.51
SCAF1-202ENST00000595242 PANX1Q96RD7 426 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms