RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 EVI2BP34910 448 aa16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 ZFP36L2P47974 494 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 HSPB2Q16082 182 aa16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 RTL6Q6ICC9 239 aa16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 ENPP6Q6UWR7 440 aa16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 IFNEQ86WN2 208 aa16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 LACC1Q8IV20 430 aa16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 WDSUB1Q8N9V3 476 aa16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 OR14L1PQ8NHC6 308 aa16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 HOXB13Q92826 284 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 ABTB1Q969K4 478 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 TIMP4Q99727 224 aa16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 NEUROD4Q9HD90 331 aa16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 SERHLQ9NQF3 203 aa16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 PPP4R1LQ9P1A2 415 aa16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 TNFRSF10DQ9UBN6 386 aa16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 CACNA1CQ13936 2221 aa16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 WDR91A4D1P6 747 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 KRT16P08779 473 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 CYP4B1P13584 511 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 LCN1P31025 176 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 PRIM2P49643 509 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 SLC18A1P54219 525 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 C21orf58P58505 322 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 EMX2Q04743 252 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 RCAN2Q14206 197 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 GANABQ14697 944 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 SLC25A35Q3KQZ1 300 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 LSM12Q3MHD2 195 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 ACSF3Q4G176 576 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 ZNF385BQ569K4 471 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 WIPI1Q5MNZ9 446 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 CPTPQ5TA50 214 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 HHATQ5VTY9 493 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 IL23RQ5VWK5 629 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 AAGABQ6PD74 315 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 SZRD1Q7Z422 152 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 MCEMP1Q8IX19 187 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 RPRMLQ8N4K4 120 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 NUP43Q8NFH3 380 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 OR4K17Q8NGC6 315 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 OR4N2Q8NGD1 307 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 MOAP1Q96BY2 351 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 UGT2B28Q9BY64 529 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 HAO1Q9UJM8 370 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 DKKL1Q9UK85 242 aa16.16■□□□□ 0.18
SHKBP1-204ENST00000594862 A0A1W2PRB8 838 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 NKX2-2O95096 273 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 EPPINO95925 133 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 BMP7P18075 431 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 GABRA3P34903 492 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 SLC1A6P48664 564 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 RPL14P50914 215 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 STX3Q13277 289 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 GAB1Q13480 694 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 PTGR1Q14914 329 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 CDSNQ15517 529 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 EIPR1Q53HC9 387 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 DESI1Q6ICB0 168 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 CCDC71Q8IV32 467 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 ZNF781Q8N8C0 355 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 GPR151Q8TDV0 419 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 OR5P2Q8WZ92 322 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 LRRC46Q96FV0 321 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 C3orf30Q96M34 536 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 C1orf50Q9BV19 199 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 BHLHE41Q9C0J9 482 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 ENKD1Q9H0I2 346 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 PTGES2Q9H7Z7 377 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 EQTNQ9NQ60 294 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 TAS2R10Q9NYW0 307 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 CAMK2AQ9UQM7 478 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 SLC6A5Q9Y345 797 aa16.15■□□□□ 0.18
SHKBP1-204ENST00000594862 A0A0G2JNJ9 132 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 CD8B2A6NJW9 211 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 FAM90A27PA6NNH2 459 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 LINC01387J3KSC0 135 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 FADS1O60427 444 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 NME6O75414 186 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 NGFRP08138 427 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 ALOX5P09917 674 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 CPN1P15169 458 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 SSTR2P30874 369 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 TIMP3P35625 211 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 PEX19P40855 299 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 GAS1P54826 345 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 DSCR4P56555 118 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 PDCD2Q16342 344 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 NSUN5P2Q63ZY6 315 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 MFSD12Q6NUT3 480 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 BHLHB9Q6PI77 547 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 CAMKMTQ7Z624 323 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 YRDCQ86U90 279 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 ACBD4Q8NC06 268 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 OR56A1Q8NGH5 318 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 RAB3IL1Q8TBN0 382 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 COQ8BQ96D53 544 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 TBL1XR1Q9BZK7 514 aa16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 ZCCHC3Q9NUD5 404 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-204ENST00000594862 GIN1Q9NXP7 522 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms