RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 PAMR1Q6UXH9 720 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 R3HCC1LQ7Z5L2 792 aaKnown RBP16■□□□□ 0.15
SHKBP1-203ENST00000594298 KIF18BQ86Y91 864 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 ZNF781Q8N8C0 355 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 MBD3L2Q8NHZ7 208 aaPredicted RBP16■□□□□ 0.15
SHKBP1-203ENST00000594298 ARL8AQ96BM9 186 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 CTHRC1Q96CG8 243 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 ZNF764Q96H86 408 aaPredicted RBP16■□□□□ 0.15
SHKBP1-203ENST00000594298 THAP1Q9NVV9 213 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 HAO1Q9UJM8 370 aa16■□□□□ 0.15
SHKBP1-203ENST00000594298 EIF3LQ9Y262 564 aaKnown RBP16■□□□□ 0.15
SHKBP1-203ENST00000594298 ZNF469Q96JG9 3925 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 TUBAL3A6NHL2 446 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 MYO1GB0I1T2 1018 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 IL18BPO95998 194 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 EPXP11678 715 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 BCKDHAP12694 445 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 BMP7P18075 431 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 SDC1P18827 310 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 S1PR1P21453 382 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 TACR1P25103 407 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 MASP1P48740 699 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 DGKQP52824 942 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 DCAF7P61962 342 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 C6orf136Q5SQH8 315 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 FAM180BQ6P0A1 224 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 TMEM81Q6P7N7 255 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 FNDC5Q8NAU1 212 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 ADCY4Q8NFM4 1077 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 MTERF3Q96E29 417 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 WDYHV1Q96HA8 205 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 TSSK3Q96PN8 268 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 SORT1Q99523 831 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 UGT2B28Q9BY64 529 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 ACBD3Q9H3P7 528 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 REEP4Q9H6H4 257 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 MANSC1Q9H8J5 431 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 ZNF395Q9H8N7 513 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 CALHM2Q9HA72 323 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 JKAMPQ9P055 326 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 ZNF639Q9UID6 485 aa15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 RPH3AQ9Y2J0 694 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 PRRC2AP48634 2157 aaKnown RBP15.99■□□□□ 0.15
SHKBP1-203ENST00000594298 HMGB1P1B2RPK0 211 aaPredicted RBP15.98■□□□□ 0.15
SHKBP1-203ENST00000594298 TBX19O60806 448 aa15.98■□□□□ 0.15
SHKBP1-203ENST00000594298 RAF1P04049 648 aa15.98■□□□□ 0.15
SHKBP1-203ENST00000594298 NAGAP17050 411 aa15.98■□□□□ 0.15
SHKBP1-203ENST00000594298 CTSSP25774 331 aa15.98■□□□□ 0.15
SHKBP1-203ENST00000594298 ABCD3P28288 659 aa15.98■□□□□ 0.15
SHKBP1-203ENST00000594298 OPRM1P35372 400 aa15.98■□□□□ 0.15
SHKBP1-203ENST00000594298 NCBP2P52298 156 aaKnown RBP eCLIP15.98■□□□□ 0.15
SHKBP1-203ENST00000594298 ADAM8P78325 824 aa15.98■□□□□ 0.15
SHKBP1-203ENST00000594298 PDCD2Q16342 344 aaPredicted RBP15.98■□□□□ 0.15
SHKBP1-203ENST00000594298 ZNF628Q5EBL2 1059 aa15.98■□□□□ 0.15
SHKBP1-203ENST00000594298 TIGD3Q6B0B8 471 aa15.98■□□□□ 0.15
SHKBP1-203ENST00000594298 PPCDCQ96CD2 204 aa15.98■□□□□ 0.15
SHKBP1-203ENST00000594298 EGLN2Q96KS0 407 aa15.98■□□□□ 0.15
SHKBP1-203ENST00000594298 C3orf30Q96M34 536 aa15.98■□□□□ 0.15
SHKBP1-203ENST00000594298 TRIB1Q96RU8 372 aa15.98■□□□□ 0.15
SHKBP1-203ENST00000594298 C20orf27Q9GZN8 174 aa15.98■□□□□ 0.15
SHKBP1-203ENST00000594298 CAMK2AQ9UQM7 478 aa15.98■□□□□ 0.15
SHKBP1-203ENST00000594298 SLC6A5Q9Y345 797 aa15.98■□□□□ 0.15
SHKBP1-203ENST00000594298 NCKAP5O14513 1909 aa15.98■□□□□ 0.15
SHKBP1-203ENST00000594298 SLCO1B7G3V0H7 640 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 PDPK1O15530 556 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 AKAP10O43572 662 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 PLOD3O60568 738 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 ATE1O95260 518 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 ACTL6AO96019 429 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 ABCB1P08183 1280 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 PCSK2P16519 638 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 GPX3P22352 226 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 PTPN6P29350 595 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 HPCAL1P37235 193 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 PSPHP78330 225 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 EMX2Q04743 252 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 DUSP2Q05923 314 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 LTB4RQ15722 352 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 TRMT12Q53H54 448 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 EIPR1Q53HC9 387 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 DCST1Q5T197 706 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 IL23RQ5VWK5 629 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 LRRC34Q8IZ02 419 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 NATD1Q8N6N6 113 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 OR52R1Q8NGF1 315 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 OR9A2Q8NGT5 310 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 ZFP28Q8NHY6 868 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 ZPLD1Q8TCW7 415 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 ABTB1Q969K4 478 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 GFM2Q969S9 779 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 PRPF18Q99633 342 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 TAS2R9Q9NYW1 312 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 SH3BP4Q9P0V3 963 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 BAIAP2L1Q9UHR4 511 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 MAPRE3Q9UPY8 281 aa15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 EXO1Q9UQ84 846 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-203ENST00000594298 ARHGAP21Q5T5U3 1957 aa15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 ANKHD1Q8IWZ3 2542 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 A0A087WV62 115 aa15.96■□□□□ 0.15
SHKBP1-203ENST00000594298 ACOX3O15254 700 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms