RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 FLRT3Q9NZU0 649 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 C15orf41Q9Y2V0 281 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 WIF1Q9Y5W5 379 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 NINQ8N4C6 2090 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 A0A1B0GVC2 190 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 PRSS51A0A1B0GVH4 220 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 C2orf72A6NCS6 295 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 C9JVG2 144 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 SUSD5O60279 629 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 LDLRP01130 860 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 IGKV1D-16P01601 117 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 IL12AP29459 219 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 RFX3P48380 749 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 PSMD4P55036 377 aaKnown RBP13.3□□□□□ -0.28
VRK3-206ENST00000594090 GSTA3Q16772 222 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 TIGD3Q6B0B8 471 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 CDC73Q6P1J9 531 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 ACAD11Q709F0 780 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 ANKRD46Q86W74 232 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 COX18Q8N8Q8 333 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 OR4A15Q8NGL6 344 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 OR1J4Q8NGS1 313 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 OR5AK3PQ8NH89 298 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 JADE3Q92613 823 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 OTUB1Q96FW1 271 aaPredicted RBP13.3□□□□□ -0.28
VRK3-206ENST00000594090 STACQ99469 402 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 ZBTB18Q99592 522 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 ACTRT3Q9BYD9 372 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 LDAHQ9H6V9 325 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 DUSP22Q9NRW4 184 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 GPATCH2Q9NW75 528 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 FAM120CQ9NX05 1096 aaKnown RBP13.3□□□□□ -0.28
VRK3-206ENST00000594090 PCDHGB4Q9UN71 923 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 ABCG2Q9UNQ0 655 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 HRH3Q9Y5N1 445 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 POLEQ07864 2286 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 TRGV5A0A0B4J1U4 118 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 RNF103-CHMP3A0A140T963 221 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 WIPF3A6NGB9 483 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 AQP7O14520 342 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 PRRG2O14669 202 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 UBDO15205 165 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 POLR3GO15318 223 aaPredicted RBP13.3□□□□□ -0.28
VRK3-206ENST00000594090 HCN1O60741 890 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 TPOP07202 933 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 KRT16P08779 473 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 ENDOUP21128 410 aaKnown RBP13.3□□□□□ -0.28
VRK3-206ENST00000594090 PTPN6P29350 595 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 MAN2A2P49641 1150 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 IDH3AP50213 366 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 DGKQP52824 942 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 GAS1P54826 345 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 PER3P56645 1201 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 BHLHB9Q6PI77 547 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 CD163Q86VB7 1156 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 WDSUB1Q8N9V3 476 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 GLB1L3Q8NCI6 653 aaPredicted RBP13.3□□□□□ -0.28
VRK3-206ENST00000594090 VPS37AQ8NEZ2 397 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 FAM57AQ8TBR7 257 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 CHMP6Q96FZ7 201 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 EBF4Q9BQW3 602 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 SLC6A15Q9H2J7 730 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 ACKR4Q9NPB9 350 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 TCF7L2Q9NQB0 619 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 SDR39U1Q9NRG7 319 aaPredicted RBP13.3□□□□□ -0.28
VRK3-206ENST00000594090 GIN1Q9NXP7 522 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 ZIM2Q9NZV7 527 aa13.3□□□□□ -0.28
VRK3-206ENST00000594090 HIVEP3Q5T1R4 2406 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 OR14I1A6ND48 311 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 CCL21O00585 134 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 ADAM10O14672 748 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 SCO2O43819 266 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 FADS1O60427 444 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 KCNK2O95069 426 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 CPSF4O95639 269 aaKnown RBP13.29□□□□□ -0.28
VRK3-206ENST00000594090 HPNP05981 417 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 PGRP06401 933 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 AQP5P55064 265 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.29□□□□□ -0.28
VRK3-206ENST00000594090 HSP90B2PQ58FF3 399 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 FIGNL1Q6PIW4 674 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 GALNT10Q86SR1 603 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 DOLPP1Q86YN1 238 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 CLEC4FQ8N1N0 589 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 NEIL3Q8TAT5 605 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 FAM110BQ8TC76 370 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 CDS1Q92903 461 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 CCDC115Q96NT0 180 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 PHF12Q96QT6 1004 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 OR52E6Q96RD3 313 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 CCDC28BQ9BUN5 200 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 BTBD2Q9BX70 525 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 PIGUQ9H490 435 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 EXO5Q9H790 373 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 MED4Q9NPJ6 270 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 SERHLQ9NQF3 203 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 SPRR3Q9UBC9 169 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 BTNL2Q9UIR0 455 aa13.29□□□□□ -0.28
VRK3-206ENST00000594090 FAF1Q9UNN5 650 aaPredicted RBP13.29□□□□□ -0.28
VRK3-206ENST00000594090 NPIPA2E9PIF3 369 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms