RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 TMEM237Q96Q45 408 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 PIGQQ9BRB3 760 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 MED18Q9BUE0 208 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 PINK1Q9BXM7 581 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 EBPLQ9BY08 206 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 RTN4RQ9BZR6 473 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 SLC35C2Q9NQQ7 365 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 OR10H1Q9Y4A9 318 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 ABCA2Q9BZC7 2435 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 PLOD3O60568 738 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 CGAP01215 116 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 POU2F1P14859 743 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 HK1P19367 917 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 LOXP28300 417 aaPredicted RBP14.74□□□□□ -0.05
LIG1-205ENST00000593425 TIA1P31483 386 aaKnown RBP eCLIP14.74□□□□□ -0.05
LIG1-205ENST00000593425 UGT2B10P36537 528 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 ZNF155Q12901 538 aaPredicted RBP14.74□□□□□ -0.05
LIG1-205ENST00000593425 STX5Q13190 355 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 ACKR1Q16570 336 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 SH2D4BQ5SQS7 431 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 ZNF678Q5SXM1 525 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 C22orf34Q6ZV56 151 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 FAM9CQ8IZT9 166 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 MEIOBQ8N635 442 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 PPP1R14CQ8TAE6 165 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 UHMK1Q8TAS1 419 aaKnown RBP14.74□□□□□ -0.05
LIG1-205ENST00000593425 ZC3HAV1LQ96H79 300 aaKnown RBP14.74□□□□□ -0.05
LIG1-205ENST00000593425 ZNF845Q96IR2 970 aaPredicted RBP14.74□□□□□ -0.05
LIG1-205ENST00000593425 MARK4Q96L34 752 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 ZNF382Q96SR6 550 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 CCL19Q99731 98 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 GIMAP4Q9NUV9 329 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 ZNF226Q9NYT6 803 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 TAS2R9Q9NYW1 312 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 MED11Q9P086 117 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 TMEM216Q9P0N5 145 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 SENP1Q9P0U3 644 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 ZNF180Q9UJW8 692 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 ZNF337Q9Y3M9 751 aa14.74□□□□□ -0.05
LIG1-205ENST00000593425 FN1P02751 2386 aaKnown RBP14.74□□□□□ -0.05
LIG1-205ENST00000593425 HEATR5AQ86XA9 2040 aa14.73□□□□□ -0.05
LIG1-205ENST00000593425 FAM171A2A8MVW0 826 aa14.73□□□□□ -0.05
LIG1-205ENST00000593425 H3BML4 177 aa14.73□□□□□ -0.05
LIG1-205ENST00000593425 SMAD7O15105 426 aaKnown RBP14.73□□□□□ -0.05
LIG1-205ENST00000593425 FADS1O60427 444 aa14.73□□□□□ -0.05
LIG1-205ENST00000593425 ULK1O75385 1050 aa14.73□□□□□ -0.05
LIG1-205ENST00000593425 HMOX2P30519 316 aa14.73□□□□□ -0.05
LIG1-205ENST00000593425 CLDN20P56880 219 aa14.73□□□□□ -0.05
LIG1-205ENST00000593425 PSPHP78330 225 aa14.73□□□□□ -0.05
LIG1-205ENST00000593425 ACSM2AQ08AH3 577 aa14.73□□□□□ -0.05
LIG1-205ENST00000593425 HEPACAMQ14CZ8 416 aa14.73□□□□□ -0.05
LIG1-205ENST00000593425 SPIN4Q56A73 249 aa14.73□□□□□ -0.05
LIG1-205ENST00000593425 ACSM2BQ68CK6 577 aa14.73□□□□□ -0.05
LIG1-205ENST00000593425 GPRIN3Q6ZVF9 776 aa14.73□□□□□ -0.05
LIG1-205ENST00000593425 YTHDF3Q7Z739 585 aaKnown RBP14.73□□□□□ -0.05
LIG1-205ENST00000593425 PRIMA1Q86XR5 153 aa14.73□□□□□ -0.05
LIG1-205ENST00000593425 SAMD14Q8IZD0 417 aaPredicted RBP14.73□□□□□ -0.05
LIG1-205ENST00000593425 FNDC9Q8TBE3 224 aa14.73□□□□□ -0.05
LIG1-205ENST00000593425 METTL6Q8TCB7 284 aa14.73□□□□□ -0.05
LIG1-205ENST00000593425 NUDT8Q8WV74 236 aa14.73□□□□□ -0.05
LIG1-205ENST00000593425 C11orf24Q96F05 449 aaPredicted RBP14.73□□□□□ -0.05
LIG1-205ENST00000593425 PERPQ96FX8 193 aa14.73□□□□□ -0.05
LIG1-205ENST00000593425 KCNA7Q96RP8 456 aa14.73□□□□□ -0.05
LIG1-205ENST00000593425 RNF122Q9H9V4 155 aa14.73□□□□□ -0.05
LIG1-205ENST00000593425 OR2M5A3KFT3 312 aa14.72□□□□□ -0.05
LIG1-205ENST00000593425 TRIM64A6NGJ6 449 aa14.72□□□□□ -0.05
LIG1-205ENST00000593425 TRIM64BA6NI03 449 aa14.72□□□□□ -0.05
LIG1-205ENST00000593425 MYO1GB0I1T2 1018 aa14.72□□□□□ -0.05
LIG1-205ENST00000593425 EMC8O43402 210 aa14.72□□□□□ -0.05
LIG1-205ENST00000593425 DLX3O60479 287 aa14.72□□□□□ -0.05
LIG1-205ENST00000593425 COQ9O75208 318 aa14.72□□□□□ -0.05
LIG1-205ENST00000593425 TNFRSF21O75509 655 aa14.72□□□□□ -0.05
LIG1-205ENST00000593425 JUNP05412 331 aaKnown RBP14.72□□□□□ -0.05
LIG1-205ENST00000593425 FPR1P21462 350 aa14.72□□□□□ -0.05
LIG1-205ENST00000593425 ECHS1P30084 290 aa14.72□□□□□ -0.05
LIG1-205ENST00000593425 MRPS22P82650 360 aaKnown RBP14.72□□□□□ -0.05
LIG1-205ENST00000593425 BTKQ06187 659 aa14.72□□□□□ -0.05
LIG1-205ENST00000593425 CKAP4Q07065 602 aaKnown RBP14.72□□□□□ -0.05
LIG1-205ENST00000593425 PON3Q15166 354 aa14.72□□□□□ -0.05
LIG1-205ENST00000593425 GUSBP1Q15486 140 aa14.72□□□□□ -0.05
LIG1-205ENST00000593425 GALNT18Q6P9A2 607 aa14.72□□□□□ -0.05
LIG1-205ENST00000593425 TMEM107Q6UX40 140 aa14.72□□□□□ -0.05
LIG1-205ENST00000593425 ZNF610Q8N9Z0 462 aa14.72□□□□□ -0.05
LIG1-205ENST00000593425 CDC26Q8NHZ8 85 aa14.72□□□□□ -0.05
LIG1-205ENST00000593425 BBS4Q96RK4 519 aa14.72□□□□□ -0.05
LIG1-205ENST00000593425 STMN4Q9H169 189 aaPredicted RBP14.72□□□□□ -0.05
LIG1-205ENST00000593425 ELOVL5Q9NYP7 299 aa14.72□□□□□ -0.05
LIG1-205ENST00000593425 DMGDHQ9UI17 866 aaKnown RBP14.72□□□□□ -0.05
LIG1-205ENST00000593425 TIMM22Q9Y584 194 aa14.72□□□□□ -0.05
LIG1-205ENST00000593425 DSCAMO60469 2012 aa14.71□□□□□ -0.05
LIG1-205ENST00000593425 NSD1Q96L73 2696 aaPredicted RBP14.71□□□□□ -0.05
LIG1-205ENST00000593425 C16orf97H3BN30 126 aa14.71□□□□□ -0.05
LIG1-205ENST00000593425 CD8BP10966 210 aa14.71□□□□□ -0.05
LIG1-205ENST00000593425 TAC1P20366 129 aa14.71□□□□□ -0.05
LIG1-205ENST00000593425 PCSK6P29122 969 aa14.71□□□□□ -0.05
LIG1-205ENST00000593425 MPIP34949 423 aa14.71□□□□□ -0.05
LIG1-205ENST00000593425 KCNJ5P48544 419 aa14.71□□□□□ -0.05
LIG1-205ENST00000593425 EEFSECP57772 596 aaKnown RBP14.71□□□□□ -0.05
LIG1-205ENST00000593425 GANABQ14697 944 aaKnown RBP14.71□□□□□ -0.05
LIG1-205ENST00000593425 ANKRD34AQ69YU3 496 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms