RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 IGKV1D-16P01601 117 aa18.34■□□□□ 0.53
CIRBP-239ENST00000592467 GRK2P25098 689 aa18.34■□□□□ 0.53
CIRBP-239ENST00000592467 CEACAM8P31997 349 aaPredicted RBP18.34■□□□□ 0.53
CIRBP-239ENST00000592467 ASMTP46597 345 aa18.34■□□□□ 0.53
CIRBP-239ENST00000592467 TOMM20Q15388 145 aa18.34■□□□□ 0.53
CIRBP-239ENST00000592467 OR5M10Q6IEU7 315 aa18.34■□□□□ 0.53
CIRBP-239ENST00000592467 GDF7Q7Z4P5 450 aa18.34■□□□□ 0.53
CIRBP-239ENST00000592467 NUDCD3Q8IVD9 361 aa18.34■□□□□ 0.53
CIRBP-239ENST00000592467 FADS6Q8N9I5 356 aa18.34■□□□□ 0.53
CIRBP-239ENST00000592467 OR10Q1Q8NGQ4 319 aa18.34■□□□□ 0.53
CIRBP-239ENST00000592467 ABTB1Q969K4 478 aaPredicted RBP18.34■□□□□ 0.53
CIRBP-239ENST00000592467 SIRT3Q9NTG7 399 aaPredicted RBP18.34■□□□□ 0.53
CIRBP-239ENST00000592467 SH3BP4Q9P0V3 963 aa18.34■□□□□ 0.53
CIRBP-239ENST00000592467 SCAMP2O15127 329 aaKnown RBP18.33■□□□□ 0.52
CIRBP-239ENST00000592467 ZIC3O60481 467 aa18.33■□□□□ 0.52
CIRBP-239ENST00000592467 SKAP2O75563 359 aaPredicted RBP18.33■□□□□ 0.52
CIRBP-239ENST00000592467 NKX2-2O95096 273 aa18.33■□□□□ 0.52
CIRBP-239ENST00000592467 ACTL6AO96019 429 aa18.33■□□□□ 0.52
CIRBP-239ENST00000592467 PRPS2P11908 318 aa18.33■□□□□ 0.52
CIRBP-239ENST00000592467 SRD5A2P31213 254 aa18.33■□□□□ 0.52
CIRBP-239ENST00000592467 EVI2BP34910 448 aa18.33■□□□□ 0.52
CIRBP-239ENST00000592467 KRT20P35900 424 aa18.33■□□□□ 0.52
CIRBP-239ENST00000592467 PTGR1Q14914 329 aa18.33■□□□□ 0.52
CIRBP-239ENST00000592467 MLC1Q15049 377 aa18.33■□□□□ 0.52
CIRBP-239ENST00000592467 CEP85LQ5SZL2 805 aa18.33■□□□□ 0.52
CIRBP-239ENST00000592467 NSUN5P2Q63ZY6 315 aa18.33■□□□□ 0.52
CIRBP-239ENST00000592467 MEX3BQ6ZN04 569 aaKnown RBP18.33■□□□□ 0.52
CIRBP-239ENST00000592467 LURAP1LQ8IV03 231 aa18.33■□□□□ 0.52
CIRBP-239ENST00000592467 PM20D2Q8IYS1 436 aa18.33■□□□□ 0.52
CIRBP-239ENST00000592467 TNIP2Q8NFZ5 429 aa18.33■□□□□ 0.52
CIRBP-239ENST00000592467 OR7A2PQ8NGA2 310 aa18.33■□□□□ 0.52
CIRBP-239ENST00000592467 ZBTB9Q96C00 473 aa18.33■□□□□ 0.52
CIRBP-239ENST00000592467 C14orf79Q96F83 325 aa18.33■□□□□ 0.52
CIRBP-239ENST00000592467 ZBED6CLQ96FA7 236 aaPredicted RBP18.33■□□□□ 0.52
CIRBP-239ENST00000592467 Q9N2J8 555 aa18.33■□□□□ 0.52
CIRBP-239ENST00000592467 KCNJ16Q9NPI9 418 aa18.33■□□□□ 0.52
CIRBP-239ENST00000592467 MRPS18CQ9Y3D5 142 aaKnown RBP18.33■□□□□ 0.52
CIRBP-239ENST00000592467 OTOGQ6ZRI0 2925 aa18.32■□□□□ 0.52
CIRBP-239ENST00000592467 WDR91A4D1P6 747 aa18.32■□□□□ 0.52
CIRBP-239ENST00000592467 BIRC5O15392 142 aa18.32■□□□□ 0.52
CIRBP-239ENST00000592467 SERPINE1P05121 402 aa18.32■□□□□ 0.52
CIRBP-239ENST00000592467 CPN1P15169 458 aa18.32■□□□□ 0.52
CIRBP-239ENST00000592467 EFNA1P20827 205 aaPredicted RBP18.32■□□□□ 0.52
CIRBP-239ENST00000592467 TIMP3P35625 211 aa18.32■□□□□ 0.52
CIRBP-239ENST00000592467 B3GALT5-AS1P59052 145 aa18.32■□□□□ 0.52
CIRBP-239ENST00000592467 CHI3L2Q15782 390 aa18.32■□□□□ 0.52
CIRBP-239ENST00000592467 LRIG3Q6UXM1 1119 aa18.32■□□□□ 0.52
CIRBP-239ENST00000592467 ADGRE4PQ86SQ3 457 aa18.32■□□□□ 0.52
CIRBP-239ENST00000592467 RIMKLAQ8IXN7 391 aa18.32■□□□□ 0.52
CIRBP-239ENST00000592467 DMRTC2Q8IXT2 367 aaPredicted RBP18.32■□□□□ 0.52
CIRBP-239ENST00000592467 ZNF781Q8N8C0 355 aa18.32■□□□□ 0.52
CIRBP-239ENST00000592467 RELL2Q8NC24 303 aaPredicted RBP18.32■□□□□ 0.52
CIRBP-239ENST00000592467 NUP43Q8NFH3 380 aa18.32■□□□□ 0.52
CIRBP-239ENST00000592467 ZFP28Q8NHY6 868 aa18.32■□□□□ 0.52
CIRBP-239ENST00000592467 PIK3R3Q92569 461 aa18.32■□□□□ 0.52
CIRBP-239ENST00000592467 PGM2Q96G03 612 aa18.32■□□□□ 0.52
CIRBP-239ENST00000592467 SORT1Q99523 831 aa18.32■□□□□ 0.52
CIRBP-239ENST00000592467 G6PC3Q9BUM1 346 aa18.32■□□□□ 0.52
CIRBP-239ENST00000592467 C1orf50Q9BV19 199 aa18.32■□□□□ 0.52
CIRBP-239ENST00000592467 CAMK2AQ9UQM7 478 aa18.32■□□□□ 0.52
CIRBP-239ENST00000592467 ACTL7BQ9Y614 415 aa18.32■□□□□ 0.52
CIRBP-239ENST00000592467 MYO9AB2RTY4 2548 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 CD8B2A6NJW9 211 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 TTC36A6NLP5 189 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 TMEM114B3SHH9 223 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 TM9SF1O15321 606 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 TUBBP07437 444 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 ACP2P11117 423 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 LAMP1P11279 417 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 GABRA3P34903 492 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 GPC1P35052 558 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 MANFP55145 182 aaKnown RBP18.31■□□□□ 0.52
CIRBP-239ENST00000592467 DLX5P56178 289 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 KRTAP10-9P60411 292 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 MRPS22P82650 360 aaKnown RBP18.31■□□□□ 0.52
CIRBP-239ENST00000592467 DECR1Q16698 335 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 ATP6AP1LQ52LC2 224 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 IL23RQ5VWK5 629 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 APOOLQ6UXV4 268 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 R3HCC1LQ7Z5L2 792 aaKnown RBP18.31■□□□□ 0.52
CIRBP-239ENST00000592467 LACC1Q8IV20 430 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 OR2M3Q8NG83 312 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 OR14L1PQ8NHC6 308 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 FAM110BQ8TC76 370 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 COQ8BQ96D53 544 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 EQTNQ9NQ60 294 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 TAS2R10Q9NYW0 307 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 HAO1Q9UJM8 370 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 ABCG2Q9UNQ0 655 aa18.31■□□□□ 0.52
CIRBP-239ENST00000592467 NUP214P35658 2090 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-239ENST00000592467 CREBBPQ92793 2442 aa18.3■□□□□ 0.52
CIRBP-239ENST00000592467 MBD3L4A6NDZ8 208 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-239ENST00000592467 MBD3L3A6NE82 208 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-239ENST00000592467 MBD3L5A6NJ08 208 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-239ENST00000592467 FAM47E-STBD1D6RA91 191 aa18.3■□□□□ 0.52
CIRBP-239ENST00000592467 SCO2O43819 266 aa18.3■□□□□ 0.52
CIRBP-239ENST00000592467 MAPK1P28482 360 aa18.3■□□□□ 0.52
CIRBP-239ENST00000592467 LHX2P50458 406 aa18.3■□□□□ 0.52
CIRBP-239ENST00000592467 ZNF136P52737 540 aa18.3■□□□□ 0.52
CIRBP-239ENST00000592467 ABCE1P61221 599 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms