RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 SCO2O43819 266 aa16.24■□□□□ 0.19
PRKCSH-211ENST00000590098 PEPDP12955 493 aa16.24■□□□□ 0.19
PRKCSH-211ENST00000590098 NTSP30990 170 aa16.24■□□□□ 0.19
PRKCSH-211ENST00000590098 MC3RP41968 323 aa16.24■□□□□ 0.19
PRKCSH-211ENST00000590098 NAA20P61599 178 aa16.24■□□□□ 0.19
PRKCSH-211ENST00000590098 FOXD4Q12950 439 aaPredicted RBP16.24■□□□□ 0.19
PRKCSH-211ENST00000590098 SLC29A2Q14542 456 aa16.24■□□□□ 0.19
PRKCSH-211ENST00000590098 CYP27C1Q4G0S4 372 aa16.24■□□□□ 0.19
PRKCSH-211ENST00000590098 OR2A2Q6IF42 318 aa16.24■□□□□ 0.19
PRKCSH-211ENST00000590098 TMEM107Q6UX40 140 aa16.24■□□□□ 0.19
PRKCSH-211ENST00000590098 CEP112Q8N8E3 955 aa16.24■□□□□ 0.19
PRKCSH-211ENST00000590098 DSN1Q9H410 356 aa16.24■□□□□ 0.19
PRKCSH-211ENST00000590098 PLEKHF2Q9H8W4 249 aa16.24■□□□□ 0.19
PRKCSH-211ENST00000590098 DDX18Q9NVP1 670 aaKnown RBP16.24■□□□□ 0.19
PRKCSH-211ENST00000590098 MRTO4Q9UKD2 239 aaKnown RBP16.24■□□□□ 0.19
PRKCSH-211ENST00000590098 A0A1W2PNV4 684 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 H3BQF6 201 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 KIF2AO00139 706 aaPredicted RBP16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 UBFD1O14562 309 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 HCRTR2O43614 444 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 ATE1O95260 518 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 TGM6O95932 706 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 HK1P19367 917 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 CPOXP36551 454 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 CLK3P49761 638 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 FOXA1P55317 472 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 EEFSECP57772 596 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 PSG6Q00889 435 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 POU4F3Q15319 338 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 ZNHIT3Q15649 155 aaPredicted RBP16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 DECR1Q16698 335 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 DEFB113Q30KQ7 82 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 CFAP157Q5JU67 520 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 RAET1LQ5VY80 246 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 FAM71E1Q6IPT2 247 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 ZYG11AQ6WRX3 759 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 UBQLNLQ8IYU4 475 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 MEIOBQ8N635 442 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 FAM76AQ8TAV0 307 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 PTGES2Q9H7Z7 377 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 Q9N2J8 555 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 MYNNQ9NPC7 610 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 RRAGDQ9NQL2 400 aaPredicted RBP16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 TAS2R7Q9NYW3 318 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 ABCG2Q9UNQ0 655 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 C19orf53Q9UNZ5 99 aaPredicted RBP16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 EIF3LQ9Y262 564 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 WBP11Q9Y2W2 641 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 PCNX3Q9H6A9 2034 aa16.23■□□□□ 0.19
PRKCSH-211ENST00000590098 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 SLC22A20A6NK97 555 aa16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 MSTNO14793 375 aa16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 FADS1O60427 444 aa16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 GLRA3O75311 464 aa16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 TNFSF13O75888 250 aa16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 SMNDC1O75940 238 aaKnown RBP eCLIP16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 HRGP04196 525 aa16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 CRHP06850 196 aa16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 B3GALT5-AS1P59052 145 aa16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 ADAM8P78325 824 aa16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 STX5Q13190 355 aa16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 GANABQ14697 944 aaKnown RBP16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 PRSS53Q2L4Q9 553 aa16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 TRIM46Q7Z4K8 759 aa16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 CNEP1R1Q8N9A8 125 aa16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 FADS6Q8N9I5 356 aa16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 OR2M3Q8NG83 312 aa16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 KIF18AQ8NI77 898 aa16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 POM121Q96HA1 1249 aa16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 MED11Q9P086 117 aa16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 EMCNQ9ULC0 261 aa16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 POLR3HQ9Y535 204 aaPredicted RBP16.22■□□□□ 0.19
PRKCSH-211ENST00000590098 C17orf51A8MQB3 221 aa16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 B4DXG7 233 aa16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 G3V2L1 256 aa16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 LINC01387J3KSC0 135 aa16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 UPK1AO00322 258 aa16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 RSL1D1O76021 490 aaKnown RBP16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 FAM153BP0C7A2 387 aa16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 FOSL1P15407 271 aa16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 PSMD4P55036 377 aaKnown RBP16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 KRTAP21-3Q3LHN1 58 aa16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 FAM153CQ494X1 144 aa16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 NOXRED1Q6NXP6 359 aa16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 FRMD7Q6ZUT3 714 aa16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 IKBIPQ70UQ0 350 aa16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 OR2L13Q8N349 312 aa16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 MZB1Q8WU39 189 aa16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 SMPDL3BQ92485 455 aa16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 ELP4Q96EB1 424 aa16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 AMDHD1Q96NU7 426 aa16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 RHOXF2Q9BQY4 288 aa16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 GLIPR2Q9H4G4 154 aa16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 C3orf14Q9HBI5 128 aa16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 NEUROD4Q9HD90 331 aa16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 FAM120CQ9NX05 1096 aaKnown RBP16.21■□□□□ 0.19
PRKCSH-211ENST00000590098 A0A1W2PPM1 405 aa16.2■□□□□ 0.18
PRKCSH-211ENST00000590098 IL33O95760 270 aa16.2■□□□□ 0.18
PRKCSH-211ENST00000590098 RFX3P48380 749 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms