RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 SOWAHCQ53LP3 525 aaPredicted RBP17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 ZNF628Q5EBL2 1059 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 TYW3Q6IPR3 259 aaKnown RBP17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 WDR53Q7Z5U6 358 aaPredicted RBP17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 OR4N5Q8IXE1 308 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 FGF11Q92914 225 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 SLC41A3Q96GZ6 507 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 PRR14Q9BWN1 585 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 EGLN3Q9H6Z9 239 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 FGF20Q9NP95 211 aaPredicted RBP17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 STUB1Q9UNE7 303 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 CHST2Q9Y4C5 530 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 A0A075B6Q4 140 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 LOC105369274A0A096LPK9 316 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 LOC102723532A0A0G2JNH3 316 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 FRS3O43559 492 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 GPX5O75715 221 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 EIF2S1P05198 315 aaKnown RBP17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 TGM1P22735 817 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 TRHRP34981 398 aaPredicted RBP17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 CCR5P51681 352 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 DUSP5Q16690 384 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 MBOAT2Q6ZWT7 520 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 RNF44Q7L0R7 432 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 BCDIN3DQ7Z5W3 292 aaKnown RBP17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 RANBP3LQ86VV4 465 aaPredicted RBP17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 OR4N4Q8N0Y3 316 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 FAM3CQ92520 227 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 PMM1Q92871 262 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 FAM46AQ96IP4 442 aaKnown RBP17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 MSLNLQ96KJ4 702 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 SDF2Q99470 211 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 NUAK2Q9H093 628 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 EXOSC4Q9NPD3 245 aaKnown RBP17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 HRASLS2Q9NWW9 162 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 NDUFB11Q9NX14 153 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 SSR3Q9UNL2 185 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 SATB2Q9UPW6 733 aa17.9■□□□□ 0.46
PRKCSH-209ENST00000589838 C5orf42Q9H799 3197 aa17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 PLOD3O60568 738 aa17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 ZIC2O95409 532 aaPredicted RBP17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 GPR75O95800 540 aa17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 AK1P00568 194 aa17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 ATP1B1P05026 303 aa17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 DBIP07108 87 aaKnown RBP17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 GLULP15104 373 aa17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 RPS3AP61247 264 aaKnown RBP17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 UBE2IP63279 158 aaKnown RBP17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 LSM11P83369 360 aaKnown RBP eCLIP17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 MINDY4Q4G0A6 757 aa17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 FHL5Q5TD97 284 aa17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 GDF7Q7Z4P5 450 aa17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 CDRT4Q8N9R6 151 aa17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 OR13H1Q8NG92 308 aa17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 HMGB4Q8WW32 186 aa17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 RFKQ969G6 155 aa17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 STACQ99469 402 aa17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 CNPPD1Q9BV87 410 aa17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 PLA2G12AQ9BZM1 189 aa17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 ISYNA1Q9NPH2 558 aa17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 MED17Q9NVC6 651 aa17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 EXOSC1Q9Y3B2 195 aaKnown RBP17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 ARHGEF17Q96PE2 2063 aaPredicted RBP17.89■□□□□ 0.45
PRKCSH-209ENST00000589838 STX11O75558 287 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 SOX30O94993 753 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 ETV6P41212 452 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 ZNF836Q6ZNA1 936 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 OOSP2Q86WS3 158 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 RBM12BQ8IXT5 1001 aaKnown RBP17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 ZNF619Q8N2I2 560 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 ANKK1Q8NFD2 765 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 ASPNQ9BXN1 380 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 KLHL25Q9H0H3 589 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 EVA1AQ9H8M9 152 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 SP140LQ9H930 580 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 DUSP22Q9NRW4 184 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 CNIH4Q9P003 139 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 USP36Q9P275 1121 aaKnown RBP17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 KRBA1A5PL33 1030 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 KDM4EB2RXH2 506 aaPredicted RBP17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 LOC110117498-PIK3R3F6TDL0 507 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 LTBRP36941 435 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 SOX3P41225 446 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 KRR1Q13601 381 aaKnown RBP17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 TMEM31Q5JXX7 168 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 SPANXN2Q5MJ10 180 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 KIAA0895LQ68EN5 471 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 NKAIN4Q8IVV8 208 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 CLDN22Q8N7P3 220 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 PIK3R3Q92569 461 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 RNFT2Q96EX2 444 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 ZNF350Q9GZX5 532 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 POLMQ9NP87 494 aaPredicted RBP17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 IL20Q9NYY1 176 aa17.88■□□□□ 0.45
PRKCSH-209ENST00000589838 TMEM129A0AVI4 362 aa17.87■□□□□ 0.45
PRKCSH-209ENST00000589838 C10orf142B7Z368 130 aa17.87■□□□□ 0.45
PRKCSH-209ENST00000589838 GALR3O60755 368 aaPredicted RBP17.87■□□□□ 0.45
PRKCSH-209ENST00000589838 HMGN1P05114 100 aa17.87■□□□□ 0.45
PRKCSH-209ENST00000589838 HBQ1P09105 142 aa17.87■□□□□ 0.45
PRKCSH-209ENST00000589838 NT5EP21589 574 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms