RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 ALOX5P09917 674 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 UQCRC2P22695 453 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 CDKN2CP42773 168 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 ATP4BP51164 291 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 STX1BP61266 288 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 SNTA1Q13424 505 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 GFRALQ6UXV0 394 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 SLC22A16Q86VW1 577 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 CHERPQ8IWX8 916 aaKnown RBP18.49■□□□□ 0.55
DDX39A-207ENST00000588542 JADE3Q92613 823 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 ZNF317Q96PQ6 595 aaPredicted RBP18.49■□□□□ 0.55
DDX39A-207ENST00000588542 STACQ99469 402 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 OSBPL11Q9BXB4 747 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 PIGUQ9H490 435 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 ZNF385DQ9H6B1 395 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 GALNT9Q9HCQ5 603 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 DUSP22Q9NRW4 184 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 BOKQ9UMX3 212 aaPredicted RBP18.49■□□□□ 0.55
DDX39A-207ENST00000588542 HRH3Q9Y5N1 445 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 KCNE3Q9Y6H6 103 aa18.49■□□□□ 0.55
DDX39A-207ENST00000588542 C2orf72A6NCS6 295 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 ACOT7O00154 380 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 KCNK2O95069 426 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 KCNH1O95259 989 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 CD1EP15812 388 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 MAGEA5P43359 124 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 GAS1P54826 345 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 HSF1Q00613 529 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 KCNC4Q03721 635 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 LRRC74AQ0VAA2 488 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 SAXO2Q658L1 398 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 SLC30A6Q6NXT4 461 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 BHLHB9Q6PI77 547 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 GALNT10Q86SR1 603 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 COX18Q8N8Q8 333 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 CDS1Q92903 461 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 VPS33AQ96AX1 596 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 TMEM41AQ96HV5 264 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 ZNF597Q96LX8 424 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 TMEM120AQ9BXJ8 343 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 DEFB127Q9H1M4 99 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 ZNF703Q9H7S9 590 aaPredicted RBP18.48■□□□□ 0.55
DDX39A-207ENST00000588542 PLSCR2Q9NRY7 297 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 FBXO34Q9NWN3 711 aa18.48■□□□□ 0.55
DDX39A-207ENST00000588542 MRTO4Q9UKD2 239 aaKnown RBP18.48■□□□□ 0.55
DDX39A-207ENST00000588542 FAF1Q9UNN5 650 aaPredicted RBP18.48■□□□□ 0.55
DDX39A-207ENST00000588542 CCDC154A6NI56 674 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 ZNHIT1O43257 154 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 FADS1O60427 444 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 KRT16P08779 473 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 CELA3AP09093 270 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 TROVE2P10155 538 aaKnown RBP eCLIP18.47■□□□□ 0.55
DDX39A-207ENST00000588542 MATN1P21941 496 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 RFX3P48380 749 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 PSMD4P55036 377 aaKnown RBP18.47■□□□□ 0.55
DDX39A-207ENST00000588542 RPS26P62854 115 aaKnown RBP18.47■□□□□ 0.55
DDX39A-207ENST00000588542 IRX1P78414 480 aaPredicted RBP18.47■□□□□ 0.55
DDX39A-207ENST00000588542 RCAN2Q14206 197 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 ELOAQ14241 798 aaKnown RBP18.47■□□□□ 0.55
DDX39A-207ENST00000588542 TIGD2Q4W5G0 525 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 FIGNL1Q6PIW4 674 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 BLOC1S3Q6QNY0 202 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 MSANTD1Q6ZTZ1 278 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 FGD2Q7Z6J4 655 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 ZAR1Q86SH2 424 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 PACS2Q86VP3 889 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 GHDCQ8N2G8 530 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 FAM109AQ8N4B1 249 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 OR5D16Q8NGK9 328 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 ADAMTS15Q8TE58 950 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 NEURL3Q96EH8 262 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 SLC35G5Q96KT7 338 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 JSRP1Q96MG2 331 aaPredicted RBP18.47■□□□□ 0.55
DDX39A-207ENST00000588542 OR7D2Q96RA2 312 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 PANX1Q96RD7 426 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 BTBD2Q9BX70 525 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 SLC52A3Q9NQ40 469 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 SLC6A13Q9NSD5 602 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 KLRF1Q9NZS2 232 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 USP9XQ93008 2570 aaPredicted RBP18.47■□□□□ 0.55
DDX39A-207ENST00000588542 BAHCC1Q9P281 2608 aa18.47■□□□□ 0.55
DDX39A-207ENST00000588542 GNB5O14775 395 aa18.46■□□□□ 0.55
DDX39A-207ENST00000588542 UTS2O95399 124 aa18.46■□□□□ 0.55
DDX39A-207ENST00000588542 GSNP06396 782 aa18.46■□□□□ 0.55
DDX39A-207ENST00000588542 NCF2P19878 526 aaPredicted RBP18.46■□□□□ 0.55
DDX39A-207ENST00000588542 EVI2BP34910 448 aa18.46■□□□□ 0.55
DDX39A-207ENST00000588542 POU6F2P78424 691 aaPredicted RBP18.46■□□□□ 0.55
DDX39A-207ENST00000588542 SRSF1Q07955 248 aaKnown RBP eCLIP18.46■□□□□ 0.551e-6■■□□□ 12.1
DDX39A-207ENST00000588542 SF3A3Q12874 501 aaKnown RBP eCLIP18.46■□□□□ 0.554e-6■■■■■ 26.8
DDX39A-207ENST00000588542 SQLEQ14534 574 aa18.46■□□□□ 0.55
DDX39A-207ENST00000588542 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.46■□□□□ 0.55
DDX39A-207ENST00000588542 CCNJQ5T5M9 372 aa18.46■□□□□ 0.55
DDX39A-207ENST00000588542 TIGD3Q6B0B8 471 aa18.46■□□□□ 0.55
DDX39A-207ENST00000588542 ANGPTL8Q6UXH0 198 aa18.46■□□□□ 0.55
DDX39A-207ENST00000588542 PRR7Q8TB68 274 aa18.46■□□□□ 0.55
DDX39A-207ENST00000588542 MIPOL1Q8TD10 442 aa18.46■□□□□ 0.55
DDX39A-207ENST00000588542 CHMP6Q96FZ7 201 aa18.46■□□□□ 0.55
DDX39A-207ENST00000588542 GNRHR2Q96P88 292 aa18.46■□□□□ 0.55
DDX39A-207ENST00000588542 SLC35A5Q9BS91 424 aa18.46■□□□□ 0.55
DDX39A-207ENST00000588542 RTN4RQ9BZR6 473 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms