RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 LINC01387J3KSC0 135 aa13.69□□□□□ -0.22
IFT20-216ENST00000588477 BCAS2O75934 225 aaPredicted RBP13.69□□□□□ -0.22
IFT20-216ENST00000588477 PLGP00747 810 aaPredicted RBP13.69□□□□□ -0.22
IFT20-216ENST00000588477 SOD3P08294 240 aa13.69□□□□□ -0.22
IFT20-216ENST00000588477 CCNG1P51959 295 aa13.69□□□□□ -0.22
IFT20-216ENST00000588477 IFT88Q13099 833 aa13.69□□□□□ -0.22
IFT20-216ENST00000588477 ZNF628Q5EBL2 1059 aa13.69□□□□□ -0.22
IFT20-216ENST00000588477 SGO1Q5FBB7 561 aa13.69□□□□□ -0.22
IFT20-216ENST00000588477 CYS1Q717R9 158 aa13.69□□□□□ -0.22
IFT20-216ENST00000588477 CCDC116Q8IYX3 515 aa13.69□□□□□ -0.22
IFT20-216ENST00000588477 METTL25Q8N6Q8 603 aa13.69□□□□□ -0.22
IFT20-216ENST00000588477 OR6K3Q8NGY3 331 aa13.69□□□□□ -0.22
IFT20-216ENST00000588477 KAT2AQ92830 837 aa13.69□□□□□ -0.22
IFT20-216ENST00000588477 FBXW5Q969U6 566 aa13.69□□□□□ -0.22
IFT20-216ENST00000588477 PFDN4Q9NQP4 134 aa13.69□□□□□ -0.22
IFT20-216ENST00000588477 SLC12A4Q9UP95 1085 aa13.69□□□□□ -0.22
IFT20-216ENST00000588477 LIPT1Q9Y234 373 aa13.69□□□□□ -0.22
IFT20-216ENST00000588477 TNPO3Q9Y5L0 923 aaKnown RBP13.69□□□□□ -0.22
IFT20-216ENST00000588477 ALPK2Q86TB3 2170 aa13.68□□□□□ -0.22
IFT20-216ENST00000588477 ADAM11O75078 769 aa13.68□□□□□ -0.22
IFT20-216ENST00000588477 DANCRP0C864 163 aa13.68□□□□□ -0.22
IFT20-216ENST00000588477 FCGR2AP12318 317 aa13.68□□□□□ -0.22
IFT20-216ENST00000588477 EVI2BP34910 448 aa13.68□□□□□ -0.22
IFT20-216ENST00000588477 CTBP2P56545 445 aa13.68□□□□□ -0.22
IFT20-216ENST00000588477 GALNT1Q10472 559 aaPredicted RBP13.68□□□□□ -0.22
IFT20-216ENST00000588477 STX5Q13190 355 aa13.68□□□□□ -0.22
IFT20-216ENST00000588477 GANABQ14697 944 aaKnown RBP13.68□□□□□ -0.22
IFT20-216ENST00000588477 ACAP2Q15057 778 aa13.68□□□□□ -0.22
IFT20-216ENST00000588477 FAM83EQ2M2I3 478 aa13.68□□□□□ -0.22
IFT20-216ENST00000588477 CTU2Q2VPK5 515 aaKnown RBP13.68□□□□□ -0.22
IFT20-216ENST00000588477 ADAM5Q6NVV9 412 aa13.68□□□□□ -0.22
IFT20-216ENST00000588477 BEND4Q6ZU67 534 aa13.68□□□□□ -0.22
IFT20-216ENST00000588477 SLC44A2Q8IWA5 706 aaPredicted RBP13.68□□□□□ -0.22
IFT20-216ENST00000588477 UHMK1Q8TAS1 419 aaKnown RBP13.68□□□□□ -0.22
IFT20-216ENST00000588477 ZNF675Q8TD23 568 aa13.68□□□□□ -0.22
IFT20-216ENST00000588477 GMPPAQ96IJ6 420 aaPredicted RBP13.68□□□□□ -0.22
IFT20-216ENST00000588477 VSTM2LQ96N03 204 aa13.68□□□□□ -0.22
IFT20-216ENST00000588477 NTMT1Q9BV86 223 aa13.68□□□□□ -0.22
IFT20-216ENST00000588477 PTGES2Q9H7Z7 377 aa13.68□□□□□ -0.22
IFT20-216ENST00000588477 FOLH1BQ9HBA9 442 aa13.68□□□□□ -0.22
IFT20-216ENST00000588477 FANCFQ9NPI8 374 aa13.68□□□□□ -0.22
IFT20-216ENST00000588477 SDHAF3Q9NRP4 125 aa13.68□□□□□ -0.22
IFT20-216ENST00000588477 FARSBQ9NSD9 589 aaKnown RBP13.68□□□□□ -0.22
IFT20-216ENST00000588477 UTS2RQ9UKP6 389 aa13.68□□□□□ -0.22
IFT20-216ENST00000588477 MAGED1Q9Y5V3 778 aaPredicted RBP13.68□□□□□ -0.22
IFT20-216ENST00000588477 CLOCKO15516 846 aa13.67□□□□□ -0.22
IFT20-216ENST00000588477 GPRIN2O60269 458 aa13.67□□□□□ -0.22
IFT20-216ENST00000588477 NDUFS7O75251 213 aa13.67□□□□□ -0.22
IFT20-216ENST00000588477 IGHV4-39P01824 125 aa13.67□□□□□ -0.22
IFT20-216ENST00000588477 C2P06681 752 aa13.67□□□□□ -0.22
IFT20-216ENST00000588477 CTAGE8P0CG41 777 aa13.67□□□□□ -0.22
IFT20-216ENST00000588477 FAM157CP0CG43 387 aa13.67□□□□□ -0.22
IFT20-216ENST00000588477 TCP1P17987 556 aaKnown RBP13.67□□□□□ -0.22
IFT20-216ENST00000588477 IL11P20809 199 aa13.67□□□□□ -0.22
IFT20-216ENST00000588477 EIF1AXP47813 144 aaKnown RBP13.67□□□□□ -0.22
IFT20-216ENST00000588477 SLC6A8P48029 635 aa13.67□□□□□ -0.22
IFT20-216ENST00000588477 MRPS22P82650 360 aaKnown RBP13.67□□□□□ -0.22
IFT20-216ENST00000588477 ERCC6LQ2NKX8 1250 aa13.67□□□□□ -0.22
IFT20-216ENST00000588477 CTAGE4Q8IX94 777 aa13.67□□□□□ -0.22
IFT20-216ENST00000588477 OR9A2Q8NGT5 310 aa13.67□□□□□ -0.22
IFT20-216ENST00000588477 DUSP19Q8WTR2 217 aa13.67□□□□□ -0.22
IFT20-216ENST00000588477 SMAP2Q8WU79 429 aaPredicted RBP13.67□□□□□ -0.22
IFT20-216ENST00000588477 NEUROG1Q92886 237 aa13.67□□□□□ -0.22
IFT20-216ENST00000588477 TACO1Q9BSH4 297 aaKnown RBP13.67□□□□□ -0.22
IFT20-216ENST00000588477 FAIM2Q9BWQ8 316 aa13.67□□□□□ -0.22
IFT20-216ENST00000588477 RTN4RQ9BZR6 473 aa13.67□□□□□ -0.22
IFT20-216ENST00000588477 ZBTB26Q9HCK0 441 aa13.67□□□□□ -0.22
IFT20-216ENST00000588477 GPR52Q9Y2T5 361 aa13.67□□□□□ -0.22
IFT20-216ENST00000588477 OR10H1Q9Y4A9 318 aa13.67□□□□□ -0.22
IFT20-216ENST00000588477 RNF115Q9Y4L5 304 aa13.67□□□□□ -0.22
IFT20-216ENST00000588477 AP4B1Q9Y6B7 739 aa13.67□□□□□ -0.22
IFT20-216ENST00000588477 CADP27708 2225 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 A0A1W2PP18 115 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 SHISA8B8ZZ34 492 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 EIF1AYO14602 144 aaKnown RBP13.66□□□□□ -0.22
IFT20-216ENST00000588477 EIF3HO15372 352 aaKnown RBP eCLIP13.66□□□□□ -0.22
IFT20-216ENST00000588477 FADS1O60427 444 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 ESRRBO95718 433 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 PDYNP01213 254 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 GSTA2P09210 222 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 PSPHP78330 225 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 MRPS25P82663 173 aaKnown RBP13.66□□□□□ -0.22
IFT20-216ENST00000588477 FAPQ12884 760 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 TRAF3Q13114 568 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 KRTAP24-1Q3LI83 254 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 SH2D4BQ5SQS7 431 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 LGSNQ5TDP6 509 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 METTL2BQ6P1Q9 378 aaKnown RBP13.66□□□□□ -0.22
IFT20-216ENST00000588477 DNM1P46Q6ZS02 220 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 GGNQ86UU5 652 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 PHF21BQ96EK2 531 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 C1GALT1C1Q96EU7 318 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 NSUN5Q96P11 429 aaKnown RBP13.66□□□□□ -0.22
IFT20-216ENST00000588477 OR10A4Q9H209 315 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 ELOVL6Q9H5J4 265 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 C12orf49Q9H741 205 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 TAS2R9Q9NYW1 312 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 FLRT3Q9NZU0 649 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 WHRNQ9P202 907 aa13.66□□□□□ -0.22
IFT20-216ENST00000588477 GDF2Q9UK05 429 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms