RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 CRB2Q5IJ48 1285 aa13.03□□□□□ -0.32
CCDC130-208ENST00000588071 ACER2Q5QJU3 275 aa13.03□□□□□ -0.32
CCDC130-208ENST00000588071 INTS11Q5TA45 600 aaKnown RBP13.03□□□□□ -0.32
CCDC130-208ENST00000588071 AGAP7PQ5VUJ5 663 aa13.03□□□□□ -0.32
CCDC130-208ENST00000588071 REEP3Q6NUK4 255 aa13.03□□□□□ -0.32
CCDC130-208ENST00000588071 OPN5Q6U736 354 aa13.03□□□□□ -0.32
CCDC130-208ENST00000588071 LRRC74BQ6ZQY2 392 aa13.03□□□□□ -0.32
CCDC130-208ENST00000588071 GALNT10Q86SR1 603 aa13.03□□□□□ -0.32
CCDC130-208ENST00000588071 HPS6Q86YV9 775 aa13.03□□□□□ -0.32
CCDC130-208ENST00000588071 CHDHQ8NE62 594 aaPredicted RBP13.03□□□□□ -0.32
CCDC130-208ENST00000588071 HIPK4Q8NE63 616 aa13.03□□□□□ -0.32
CCDC130-208ENST00000588071 FAM110BQ8TC76 370 aa13.03□□□□□ -0.32
CCDC130-208ENST00000588071 APOBEC4Q8WW27 367 aaKnown RBP13.03□□□□□ -0.32
CCDC130-208ENST00000588071 PSMF1Q92530 271 aa13.03□□□□□ -0.32
CCDC130-208ENST00000588071 EFHD2Q96C19 240 aaPredicted RBP13.03□□□□□ -0.32
CCDC130-208ENST00000588071 AGAP4Q96P64 663 aa13.03□□□□□ -0.32
CCDC130-208ENST00000588071 LMF1Q96S06 567 aa13.03□□□□□ -0.32
CCDC130-208ENST00000588071 RASL10BQ96S79 203 aa13.03□□□□□ -0.32
CCDC130-208ENST00000588071 ADOQ96SZ5 270 aa13.03□□□□□ -0.32
CCDC130-208ENST00000588071 ZBTB20Q9HC78 741 aaPredicted RBP13.03□□□□□ -0.32
CCDC130-208ENST00000588071 EGFL7Q9UHF1 273 aa13.03□□□□□ -0.32
CCDC130-208ENST00000588071 WDR45Q9Y484 360 aa13.03□□□□□ -0.32
CCDC130-208ENST00000588071 EML6Q6ZMW3 1958 aa13.03□□□□□ -0.32
CCDC130-208ENST00000588071 EXPH5Q8NEV8 1989 aa13.03□□□□□ -0.32
CCDC130-208ENST00000588071 CPAMD8Q8IZJ3 1885 aa13.02□□□□□ -0.32
CCDC130-208ENST00000588071 A0A0G2JPF8 293 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 HNRNPCL2B2RXH8 293 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 HNRNPCL3B7ZW38 293 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 HS6ST1O60243 411 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 PPM1BO75688 479 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 DNAJB5O75953 348 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 SORBS2O94875 1100 aaKnown RBP13.02□□□□□ -0.33
CCDC130-208ENST00000588071 NADKO95544 446 aaPredicted RBP13.02□□□□□ -0.33
CCDC130-208ENST00000588071 IL33O95760 270 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 ALPPP05187 535 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 HNRNPCL4P0DMR1 293 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 NAGAP17050 411 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 TMED10P49755 219 aaKnown RBP13.02□□□□□ -0.33
CCDC130-208ENST00000588071 PNLIPRP2P54317 469 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 CHRNEQ04844 493 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 VEZF1Q14119 521 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 GPR68Q15743 365 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 GLYATQ6IB77 296 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 OLIG3Q7RTU3 272 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 APLFQ8IW19 511 aaPredicted RBP13.02□□□□□ -0.33
CCDC130-208ENST00000588071 ULK2Q8IYT8 1036 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 ARMC10Q8N2F6 343 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 KDF1Q8NAX2 398 aaPredicted RBP13.02□□□□□ -0.33
CCDC130-208ENST00000588071 OR5M3Q8NGP4 307 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 FIG4Q92562 907 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 DIO2Q92813 273 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 RAB3IPQ96QF0 476 aaPredicted RBP13.02□□□□□ -0.33
CCDC130-208ENST00000588071 MTHFD2LQ9H903 347 aaPredicted RBP13.02□□□□□ -0.33
CCDC130-208ENST00000588071 CACYBPQ9HB71 228 aaKnown RBP13.02□□□□□ -0.33
CCDC130-208ENST00000588071 RYDENQ9NUL5 291 aaKnown RBP13.02□□□□□ -0.33
CCDC130-208ENST00000588071 FBXO34Q9NWN3 711 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 MKLN1Q9UL63 735 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 ZNF451Q9Y4E5 1061 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 APC2O95996 2303 aa13.02□□□□□ -0.33
CCDC130-208ENST00000588071 NINQ8N4C6 2090 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 CXCR6O00574 342 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 TSPAN2O60636 221 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 FCMRO60667 390 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 ZNF354AO60765 605 aaPredicted RBP13.01□□□□□ -0.33
CCDC130-208ENST00000588071 PGM3O95394 542 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 IGKV1D-16P01601 117 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 CHRM4P08173 479 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 AQP1P29972 269 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 SOX3P41225 446 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 ST13P50502 369 aaKnown RBP13.01□□□□□ -0.33
CCDC130-208ENST00000588071 FUT5Q11128 374 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 BNIP2Q12982 314 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 EFR3AQ14156 821 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 TRIM25Q14258 630 aaKnown RBP13.01□□□□□ -0.33
CCDC130-208ENST00000588071 MAPK11Q15759 364 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.01□□□□□ -0.33
CCDC130-208ENST00000588071 FLYWCH1Q4VC44 716 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 RPS26P11Q5JNZ5 115 aaPredicted RBP13.01□□□□□ -0.33
CCDC130-208ENST00000588071 PRAMEF8Q5VWM4 474 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 PRAMEF7Q5VXH5 474 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 TYW3Q6IPR3 259 aaKnown RBP13.01□□□□□ -0.33
CCDC130-208ENST00000588071 PGM2L1Q6PCE3 622 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 BORAQ6PGQ7 559 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 ISLR2Q6UXK2 745 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 IL20RBQ6UXL0 311 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 LINC00696Q6ZRV3 163 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 NUP54Q7Z3B4 507 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 BEST3Q8N1M1 668 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 ZNF619Q8N2I2 560 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 FDCSPQ8NFU4 85 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 BBS10Q8TAM1 723 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 FAM162AQ96A26 154 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 CCDC124Q96CT7 223 aaKnown RBP13.01□□□□□ -0.33
CCDC130-208ENST00000588071 TMCO6Q96DC7 493 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 SPACA9Q96E40 222 aaPredicted RBP13.01□□□□□ -0.33
CCDC130-208ENST00000588071 COL21A1Q96P44 957 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 ZNF607Q96SK3 696 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 TREX2Q9BQ50 279 aaPredicted RBP13.01□□□□□ -0.33
CCDC130-208ENST00000588071 ZNF350Q9GZX5 532 aa13.01□□□□□ -0.33
CCDC130-208ENST00000588071 HOXD1Q9GZZ0 328 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms