RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 PLSCR4Q9NRQ2 329 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 PPP4R1LQ9P1A2 415 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 CPSF2Q9P2I0 782 aaKnown RBP12.68□□□□□ -0.38
CXXC1-208ENST00000587170 ZNF780BQ9Y6R6 833 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 MALRD1Q5VYJ5 2156 aa12.67□□□□□ -0.38
CXXC1-208ENST00000587170 RNF212BA8MTL3 300 aa12.67□□□□□ -0.38
CXXC1-208ENST00000587170 PLOD3O60568 738 aa12.67□□□□□ -0.38
CXXC1-208ENST00000587170 SS18L1O75177 396 aaPredicted RBP12.67□□□□□ -0.38
CXXC1-208ENST00000587170 AQP8O94778 261 aa12.67□□□□□ -0.38
CXXC1-208ENST00000587170 PLAUP00749 431 aa12.67□□□□□ -0.38
CXXC1-208ENST00000587170 HK1P19367 917 aa12.67□□□□□ -0.38
CXXC1-208ENST00000587170 KRT20P35900 424 aa12.67□□□□□ -0.38
CXXC1-208ENST00000587170 GLYR1Q49A26 553 aaPredicted RBP12.67□□□□□ -0.38
CXXC1-208ENST00000587170 ANKRD34AQ69YU3 496 aa12.67□□□□□ -0.38
CXXC1-208ENST00000587170 FAM180BQ6P0A1 224 aa12.67□□□□□ -0.38
CXXC1-208ENST00000587170 PODNL1Q6PEZ8 512 aa12.67□□□□□ -0.38
CXXC1-208ENST00000587170 HIPK1Q86Z02 1210 aa12.67□□□□□ -0.38
CXXC1-208ENST00000587170 SAMD14Q8IZD0 417 aaPredicted RBP12.67□□□□□ -0.38
CXXC1-208ENST00000587170 FBF1Q8TES7 1133 aa12.67□□□□□ -0.38
CXXC1-208ENST00000587170 EFHD2Q96C19 240 aaPredicted RBP12.67□□□□□ -0.38
CXXC1-208ENST00000587170 NSUN5Q96P11 429 aaKnown RBP12.67□□□□□ -0.38
CXXC1-208ENST00000587170 KLHL4Q9C0H6 718 aa12.67□□□□□ -0.38
CXXC1-208ENST00000587170 DSN1Q9H410 356 aa12.67□□□□□ -0.38
CXXC1-208ENST00000587170 ELOVL6Q9H5J4 265 aa12.67□□□□□ -0.38
CXXC1-208ENST00000587170 FARSBQ9NSD9 589 aaKnown RBP12.67□□□□□ -0.38
CXXC1-208ENST00000587170 UTS2RQ9UKP6 389 aa12.67□□□□□ -0.38
CXXC1-208ENST00000587170 TMCO1Q9UM00 188 aa12.67□□□□□ -0.38
CXXC1-208ENST00000587170 SLC12A4Q9UP95 1085 aa12.67□□□□□ -0.38
CXXC1-208ENST00000587170 AP4B1Q9Y6B7 739 aa12.67□□□□□ -0.38
CXXC1-208ENST00000587170 A0A096LPK6 155 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 IGLV3-32A0A0A0MS00 114 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 FAM187AA6NFU0 413 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 RNF223E7ERA6 249 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 SEC14L5O43304 696 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 CD5LO43866 347 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 NME6O75414 186 aaPredicted RBP12.66□□□□□ -0.38
CXXC1-208ENST00000587170 PDYNP01213 254 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 RPS17P08708 135 aaKnown RBP12.66□□□□□ -0.38
CXXC1-208ENST00000587170 PSMB1P20618 241 aaKnown RBP12.66□□□□□ -0.38
CXXC1-208ENST00000587170 ARL1P40616 181 aaPredicted RBP12.66□□□□□ -0.38
CXXC1-208ENST00000587170 RPS4XP62701 263 aaKnown RBP12.66□□□□□ -0.38
CXXC1-208ENST00000587170 PSG6Q00889 435 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 GUCY2DQ02846 1103 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.66□□□□□ -0.38
CXXC1-208ENST00000587170 CLEC12BQ2HXU8 276 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 ERCC6LQ2NKX8 1250 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 MROH9Q5TGP6 573 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 TTC19Q6DKK2 380 aaPredicted RBP12.66□□□□□ -0.38
CXXC1-208ENST00000587170 HMBOX1Q6NT76 420 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 C1orf52Q8N6N3 182 aaKnown RBP12.66□□□□□ -0.38
CXXC1-208ENST00000587170 OR4F6Q8NGB9 312 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 OR9A2Q8NGT5 310 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 GFM2Q969S9 779 aaKnown RBP12.66□□□□□ -0.38
CXXC1-208ENST00000587170 ATP6V1E2Q96A05 226 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 C1GALT1C1Q96EU7 318 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 PLPPR2Q96GM1 343 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 GMPPAQ96IJ6 420 aaPredicted RBP12.66□□□□□ -0.38
CXXC1-208ENST00000587170 SHCBP1LQ9BZQ2 653 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 STMN4Q9H169 189 aaPredicted RBP12.66□□□□□ -0.38
CXXC1-208ENST00000587170 DPH5Q9H2P9 285 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 FAM120CQ9NX05 1096 aaKnown RBP12.66□□□□□ -0.38
CXXC1-208ENST00000587170 RNF14Q9UBS8 474 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 EMC9Q9Y3B6 208 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 SAR1BQ9Y6B6 198 aa12.66□□□□□ -0.38
CXXC1-208ENST00000587170 ALPK2Q86TB3 2170 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 H3BML4 177 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 SCO2O43819 266 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 PSMG1O95456 288 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 IFNA2P01563 188 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 DANCRP0C864 163 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 MAGEA4P43358 317 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 MAGEA12P43365 314 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 ALDH9A1P49189 494 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 SERPINB8P50452 374 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 RPS3AP61247 264 aaKnown RBP12.65□□□□□ -0.38
CXXC1-208ENST00000587170 ZNF844Q08AG5 666 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 VEZF1Q14119 521 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 LETMD1Q6P1Q0 360 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 SLC44A2Q8IWA5 706 aaPredicted RBP12.65□□□□□ -0.38
CXXC1-208ENST00000587170 CCDC116Q8IYX3 515 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 OR7G2Q8NG99 324 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 OR4N2Q8NGD1 307 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 LILRB1Q8NHL6 650 aaPredicted RBP12.65□□□□□ -0.38
CXXC1-208ENST00000587170 KAT2AQ92830 837 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 C1QTNF3Q9BXJ4 246 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 REG4Q9BYZ8 158 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 RTN4RQ9BZR6 473 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 PTGES2Q9H7Z7 377 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 SDHAF3Q9NRP4 125 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 TAS2R9Q9NYW1 312 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 MCM8Q9UJA3 840 aa12.65□□□□□ -0.38
CXXC1-208ENST00000587170 OTCP00480 354 aa12.64□□□□□ -0.39
CXXC1-208ENST00000587170 F12P00748 615 aaPredicted RBP12.64□□□□□ -0.39
CXXC1-208ENST00000587170 IL3P08700 152 aa12.64□□□□□ -0.39
CXXC1-208ENST00000587170 HSD3B1P14060 373 aa12.64□□□□□ -0.39
CXXC1-208ENST00000587170 ZNF17P17021 662 aa12.64□□□□□ -0.39
CXXC1-208ENST00000587170 HSD3B2P26439 372 aa12.64□□□□□ -0.39
CXXC1-208ENST00000587170 SLC6A8P48029 635 aa12.64□□□□□ -0.39
CXXC1-208ENST00000587170 MRPS25P82663 173 aaKnown RBP12.64□□□□□ -0.39
CXXC1-208ENST00000587170 EXOC3L2Q2M3D2 409 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms