RNA–Protein interactions for RNA: ENST00000586975.1

CLPTM1-206, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-206ENST00000586975 EFNA1P20827 205 aaPredicted RBP17.3■□□□□ 0.36
CLPTM1-206ENST00000586975 DPP4P27487 766 aa17.3■□□□□ 0.36
CLPTM1-206ENST00000586975 SRD5A2P31213 254 aa17.3■□□□□ 0.36
CLPTM1-206ENST00000586975 ZNF136P52737 540 aa17.3■□□□□ 0.36
CLPTM1-206ENST00000586975 DGKQP52824 942 aa17.3■□□□□ 0.36
CLPTM1-206ENST00000586975 MANFP55145 182 aaKnown RBP17.3■□□□□ 0.36
CLPTM1-206ENST00000586975 AAGABQ6PD74 315 aa17.3■□□□□ 0.36
CLPTM1-206ENST00000586975 RELL2Q8NC24 303 aaPredicted RBP17.3■□□□□ 0.36
CLPTM1-206ENST00000586975 ZFP28Q8NHY6 868 aa17.3■□□□□ 0.36
CLPTM1-206ENST00000586975 DTNBP1Q96EV8 351 aa17.3■□□□□ 0.36
CLPTM1-206ENST00000586975 LRRC46Q96FV0 321 aa17.3■□□□□ 0.36
CLPTM1-206ENST00000586975 TUBA1CQ9BQE3 449 aa17.3■□□□□ 0.36
CLPTM1-206ENST00000586975 DSN1Q9H410 356 aa17.3■□□□□ 0.36
CLPTM1-206ENST00000586975 GIMAP2Q9UG22 337 aa17.3■□□□□ 0.36
CLPTM1-206ENST00000586975 KCNN3Q9UGI6 736 aa17.3■□□□□ 0.36
CLPTM1-206ENST00000586975 MRTO4Q9UKD2 239 aaKnown RBP17.3■□□□□ 0.36
CLPTM1-206ENST00000586975 FREM3P0C091 2139 aa17.3■□□□□ 0.36
CLPTM1-206ENST00000586975 INTS1Q8N201 2190 aaKnown RBP17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 OTOGQ6ZRI0 2925 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 GXYLT2A0PJZ3 443 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 PEX11AO75192 247 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 FGF4P08620 206 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 PRPS2P11908 318 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 CLK3P49761 638 aaKnown RBP17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 GAS1P54826 345 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 KRT71Q3SY84 523 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 PLXDC2Q6UX71 529 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 CDH24Q86UP0 819 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 ZZZ3Q8IYH5 903 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 C9orf106Q8NAJ2 232 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 FBXO30Q8TB52 745 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 ZPLD1Q8TCW7 415 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 GPR151Q8TDV0 419 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 PIK3R3Q92569 461 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 CAVIN3Q969G5 261 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 ZBTB9Q96C00 473 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 ZBED6CLQ96FA7 236 aaPredicted RBP17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 FCRL1Q96LA6 429 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 CALHM2Q9HA72 323 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 C3orf14Q9HBI5 128 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 SLC24A3Q9HC58 644 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 SDHAF3Q9NRP4 125 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 MED11Q9P086 117 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 ZNF629Q9UEG4 869 aaPredicted RBP17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 TMED5Q9Y3A6 229 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 L3MBTL1Q9Y468 752 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 POLQO75417 2590 aa17.29■□□□□ 0.36
CLPTM1-206ENST00000586975 HCFC1P51610 2035 aa17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 EEF1E1-BLOC1S5C9J1V9 151 aa17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 EEF1E1O43324 174 aaKnown RBP17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 GMFGO60234 142 aa17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 SKAP2O75563 359 aaPredicted RBP17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 KCNH1O95259 989 aa17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 PSMG1O95456 288 aa17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 IL33O95760 270 aa17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 BCKDHAP12694 445 aa17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 CPN1P15169 458 aa17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 KIR2DL3P43628 341 aa17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 ASMTP46597 345 aa17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 ASCL1P50553 236 aa17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 PSMD4P55036 377 aaKnown RBP17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 GFRA1P56159 465 aa17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 UGT3A2Q3SY77 523 aa17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 WDR93Q6P2C0 686 aa17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 RNF165Q6ZSG1 346 aa17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 GALNT10Q86SR1 603 aa17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 MARCH3Q86UD3 253 aa17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 EXOC3L1Q86VI1 746 aa17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 PPP1R14CQ8TAE6 165 aa17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 SLC9A6Q92581 669 aa17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 RMND5BQ96G75 393 aaPredicted RBP17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 LMF2Q9BU23 707 aaKnown RBP17.28■□□□□ 0.36
CLPTM1-206ENST00000586975 WDR91A4D1P6 747 aa17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 MBD3L4A6NDZ8 208 aaPredicted RBP17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 MBD3L3A6NE82 208 aaPredicted RBP17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 MBD3L5A6NJ08 208 aaPredicted RBP17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 CLCA1A8K7I4 914 aa17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 TMEM114B3SHH9 223 aa17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 B4DXG7 233 aa17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 SYT5O00445 386 aa17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 FADS1O60427 444 aa17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 ZIC3O60481 467 aa17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 BPGMP07738 259 aa17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 TMIGD3P0DMS9 266 aaPredicted RBP17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 HK1P19367 917 aa17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 CTSSP25774 331 aa17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 HPCAL1P37235 193 aa17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 LHX2P50458 406 aa17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 DSCR4P56555 118 aaPredicted RBP17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 RAET1LQ5VY80 246 aa17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 HOMEZQ8IX15 550 aa17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 UBQLNLQ8IYU4 475 aa17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 NUP43Q8NFH3 380 aa17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 CEP70Q8NHQ1 597 aa17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 MBD3L2Q8NHZ7 208 aaPredicted RBP17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 DUSP19Q8WTR2 217 aa17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 RNF138Q8WVD3 245 aa17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 RNASE6Q93091 150 aaKnown RBP17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 CHMP6Q96FZ7 201 aa17.27■□□□□ 0.36
CLPTM1-206ENST00000586975 PPP3R2Q96LZ3 170 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms