RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 LTBQ06643 244 aa17.48■□□□□ 0.39
TRAF4-216ENST00000586813 FAM27E3Q08E93 113 aa17.48■□□□□ 0.39
TRAF4-216ENST00000586813 LCP2Q13094 533 aa17.48■□□□□ 0.39
TRAF4-216ENST00000586813 LGSNQ5TDP6 509 aa17.48■□□□□ 0.39
TRAF4-216ENST00000586813 SHEQ5VZ18 495 aa17.48■□□□□ 0.39
TRAF4-216ENST00000586813 VWA1Q6PCB0 445 aa17.48■□□□□ 0.39
TRAF4-216ENST00000586813 TIFABQ6ZNK6 161 aa17.48■□□□□ 0.39
TRAF4-216ENST00000586813 LCA5Q86VQ0 697 aa17.48■□□□□ 0.39
TRAF4-216ENST00000586813 MEIOBQ8N635 442 aa17.48■□□□□ 0.39
TRAF4-216ENST00000586813 OR2M3Q8NG83 312 aa17.48■□□□□ 0.39
TRAF4-216ENST00000586813 KCNA7Q96RP8 456 aa17.48■□□□□ 0.39
TRAF4-216ENST00000586813 KLHL28Q9NXS3 571 aa17.48■□□□□ 0.39
TRAF4-216ENST00000586813 C6orf203Q9P0P8 240 aaPredicted RBP17.48■□□□□ 0.39
TRAF4-216ENST00000586813 RAI1Q7Z5J4 1906 aaPredicted RBP17.48■□□□□ 0.39
TRAF4-216ENST00000586813 SIAH2O43255 324 aa17.47■□□□□ 0.39
TRAF4-216ENST00000586813 CTIFO43310 598 aaKnown RBP17.47■□□□□ 0.39
TRAF4-216ENST00000586813 ANXA4P09525 319 aaPredicted RBP17.47■□□□□ 0.39
TRAF4-216ENST00000586813 DDCP20711 480 aa17.47■□□□□ 0.39
TRAF4-216ENST00000586813 GCAP28676 217 aa17.47■□□□□ 0.39
TRAF4-216ENST00000586813 MC3RP41968 323 aa17.47■□□□□ 0.39
TRAF4-216ENST00000586813 PRKAA2P54646 552 aa17.47■□□□□ 0.39
TRAF4-216ENST00000586813 PKNOX1P55347 436 aa17.47■□□□□ 0.39
TRAF4-216ENST00000586813 BTKQ06187 659 aa17.47■□□□□ 0.39
TRAF4-216ENST00000586813 ZNF763Q0D2J5 394 aa17.47■□□□□ 0.39
TRAF4-216ENST00000586813 GANABQ14697 944 aaKnown RBP17.47■□□□□ 0.39
TRAF4-216ENST00000586813 SH2D4BQ5SQS7 431 aa17.47■□□□□ 0.39
TRAF4-216ENST00000586813 RAET1LQ5VY80 246 aa17.47■□□□□ 0.39
TRAF4-216ENST00000586813 Q71RC1 249 aaPredicted RBP17.47■□□□□ 0.39
TRAF4-216ENST00000586813 SLC22A9Q8IVM8 553 aa17.47■□□□□ 0.39
TRAF4-216ENST00000586813 L3HYPDHQ96EM0 354 aa17.47■□□□□ 0.39
TRAF4-216ENST00000586813 WFIKKN1Q96NZ8 548 aa17.47■□□□□ 0.39
TRAF4-216ENST00000586813 FAM111AQ96PZ2 611 aa17.47■□□□□ 0.39
TRAF4-216ENST00000586813 BBS4Q96RK4 519 aa17.47■□□□□ 0.39
TRAF4-216ENST00000586813 DSN1Q9H410 356 aa17.47■□□□□ 0.39
TRAF4-216ENST00000586813 SIRT5Q9NXA8 310 aa17.47■□□□□ 0.39
TRAF4-216ENST00000586813 FLRT3Q9NZU0 649 aa17.47■□□□□ 0.39
TRAF4-216ENST00000586813 ABCG2Q9UNQ0 655 aa17.47■□□□□ 0.39
TRAF4-216ENST00000586813 TIMM22Q9Y584 194 aa17.47■□□□□ 0.39
TRAF4-216ENST00000586813 ABCA2Q9BZC7 2435 aa17.47■□□□□ 0.39
TRAF4-216ENST00000586813 A0A087WV62 115 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 CCDC151A5D8V7 595 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 DEFB108AA8MXU0 73 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 MYO1GB0I1T2 1018 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 FADS1O60427 444 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 JUNP05412 331 aaKnown RBP17.46■□□□□ 0.39
TRAF4-216ENST00000586813 HK1P19367 917 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 CCKARP32238 428 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 CD79BP40259 229 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 KIR2DL2P43627 348 aaPredicted RBP17.46■□□□□ 0.39
TRAF4-216ENST00000586813 NCBP2P52298 156 aaKnown RBP eCLIP17.46■□□□□ 0.39
TRAF4-216ENST00000586813 CLDN15P56746 228 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 STX5Q13190 355 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 PRSS53Q2L4Q9 553 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 CYP27C1Q4G0S4 372 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 ZNF474Q6S9Z5 364 aaPredicted RBP17.46■□□□□ 0.39
TRAF4-216ENST00000586813 TMEM107Q6UX40 140 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 BTLAQ7Z6A9 289 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 CDC26Q8NHZ8 85 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 FIG4Q92562 907 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 ZNF592Q92610 1267 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 PGM2Q96G03 612 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 C16orf45Q96MC5 204 aaPredicted RBP17.46■□□□□ 0.39
TRAF4-216ENST00000586813 RTN4RQ9BZR6 473 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 OPN3Q9H1Y3 402 aaPredicted RBP17.46■□□□□ 0.39
TRAF4-216ENST00000586813 MIEF1Q9NQG6 463 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 SDHAF3Q9NRP4 125 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 ZNF226Q9NYT6 803 aa17.46■□□□□ 0.39
TRAF4-216ENST00000586813 HEATR5AQ86XA9 2040 aa17.45■□□□□ 0.38
TRAF4-216ENST00000586813 SERTM1A2A2V5 107 aa17.45■□□□□ 0.38
TRAF4-216ENST00000586813 H0YC42 278 aa17.45■□□□□ 0.38
TRAF4-216ENST00000586813 SEC14L5O43304 696 aa17.45■□□□□ 0.38
TRAF4-216ENST00000586813 SLITRK5O94991 958 aa17.45■□□□□ 0.38
TRAF4-216ENST00000586813 PSMG1O95456 288 aa17.45■□□□□ 0.38
TRAF4-216ENST00000586813 ABHD2P08910 425 aa17.45■□□□□ 0.38
TRAF4-216ENST00000586813 TPD52P55327 224 aaPredicted RBP17.45■□□□□ 0.38
TRAF4-216ENST00000586813 EEFSECP57772 596 aaKnown RBP17.45■□□□□ 0.38
TRAF4-216ENST00000586813 SIRPAP78324 504 aa17.45■□□□□ 0.38
TRAF4-216ENST00000586813 SPDYAQ5MJ70 313 aa17.45■□□□□ 0.38
TRAF4-216ENST00000586813 Q5PR19 223 aa17.45■□□□□ 0.38
TRAF4-216ENST00000586813 MED18Q9BUE0 208 aa17.45■□□□□ 0.38
TRAF4-216ENST00000586813 PINK1Q9BXM7 581 aa17.45■□□□□ 0.38
TRAF4-216ENST00000586813 GSTO2Q9H4Y5 243 aa17.45■□□□□ 0.38
TRAF4-216ENST00000586813 RNF122Q9H9V4 155 aa17.45■□□□□ 0.38
TRAF4-216ENST00000586813 FAM120CQ9NX05 1096 aaKnown RBP17.45■□□□□ 0.38
TRAF4-216ENST00000586813 MED11Q9P086 117 aa17.45■□□□□ 0.38
TRAF4-216ENST00000586813 C19orf53Q9UNZ5 99 aaPredicted RBP17.45■□□□□ 0.38
TRAF4-216ENST00000586813 ZNF337Q9Y3M9 751 aa17.45■□□□□ 0.38
TRAF4-216ENST00000586813 DSCAMO60469 2012 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 H3BML4 177 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 UPK1AO00322 258 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 ARHGEF9O43307 516 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 TNFRSF21O75509 655 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 POU2F1P14859 743 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 CRYGSP22914 178 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 UGT2B10P36537 528 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 SUCLG1P53597 346 aaKnown RBP17.44■□□□□ 0.38
TRAF4-216ENST00000586813 FOXA1P55317 472 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 C2orf80Q0P641 193 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 DECR1Q16698 335 aa17.44■□□□□ 0.38
TRAF4-216ENST00000586813 CLEC9AQ6UXN8 241 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms