RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 OTUB1Q96FW1 271 aaPredicted RBP17.6■□□□□ 0.41
DDX39A-204ENST00000586558 FAM173AQ9BQD7 235 aa17.6■□□□□ 0.41
DDX39A-204ENST00000586558 CCDC106Q9BWC9 280 aa17.6■□□□□ 0.41
DDX39A-204ENST00000586558 OR51I1Q9H343 314 aa17.6■□□□□ 0.41
DDX39A-204ENST00000586558 LUZP4Q9P127 313 aa17.6■□□□□ 0.41
DDX39A-204ENST00000586558 TRBV5-3A0A0A0MS03 114 aa17.59■□□□□ 0.41
DDX39A-204ENST00000586558 TTLL8A6PVC2 850 aa17.59■□□□□ 0.41
DDX39A-204ENST00000586558 B8ZZF3 427 aa17.59■□□□□ 0.41
DDX39A-204ENST00000586558 SUV39H1O43463 412 aa17.59■□□□□ 0.41
DDX39A-204ENST00000586558 NPPAP01160 153 aa17.59■□□□□ 0.41
DDX39A-204ENST00000586558 GTDC1Q4AE62 458 aa17.59■□□□□ 0.41
DDX39A-204ENST00000586558 DCST2Q5T1A1 773 aa17.59■□□□□ 0.41
DDX39A-204ENST00000586558 TNFAIP8L2Q6P589 184 aaPredicted RBP17.59■□□□□ 0.41
DDX39A-204ENST00000586558 DLEU7Q6UYE1 221 aa17.59■□□□□ 0.41
DDX39A-204ENST00000586558 SULF2Q8IWU5 870 aa17.59■□□□□ 0.41
DDX39A-204ENST00000586558 CHDHQ8NE62 594 aaPredicted RBP17.59■□□□□ 0.41
DDX39A-204ENST00000586558 OR2M7Q8NG81 312 aa17.59■□□□□ 0.41
DDX39A-204ENST00000586558 OR52N2Q8NGI0 321 aa17.59■□□□□ 0.41
DDX39A-204ENST00000586558 OR5D16Q8NGK9 328 aa17.59■□□□□ 0.41
DDX39A-204ENST00000586558 RP9Q8TA86 221 aaKnown RBP17.59■□□□□ 0.41
DDX39A-204ENST00000586558 METTL7AQ9H8H3 244 aa17.59■□□□□ 0.41
DDX39A-204ENST00000586558 THUMPD1Q9NXG2 353 aaKnown RBP17.59■□□□□ 0.41
DDX39A-204ENST00000586558 SLC25A37Q9NYZ2 338 aa17.59■□□□□ 0.41
DDX39A-204ENST00000586558 ABCG2Q9UNQ0 655 aa17.59■□□□□ 0.41
DDX39A-204ENST00000586558 CORO2BQ9UQ03 480 aa17.59■□□□□ 0.41
DDX39A-204ENST00000586558 PRAMEF25A6NGN4 478 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 CLIC1O00299 241 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 FBP2O00757 339 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 C1QL1O75973 258 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 SNX4O95219 450 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 IGKV1D-16P01601 117 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 CRYABP02511 175 aaKnown RBP17.58■□□□□ 0.4
DDX39A-204ENST00000586558 PRB1P04280 392 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 NGFRP08138 427 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 CYP4B1P13584 511 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 ATP6V1C1P21283 382 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 CASP3P42574 277 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 RFX3P48380 749 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 MVDP53602 400 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 KCNJ2P63252 427 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 FADDQ13158 208 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 NFYCQ13952 458 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 TRMT5Q32P41 509 aaKnown RBP17.58■□□□□ 0.4
DDX39A-204ENST00000586558 MMEL1Q495T6 779 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 HEPHL1Q6MZM0 1159 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 SLC30A6Q6NXT4 461 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 FAM180AQ6UWF9 173 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 C16orf62Q7Z3J2 963 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 MSRB3Q8IXL7 192 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 ZFP62Q8NB50 900 aaPredicted RBP17.58■□□□□ 0.4
DDX39A-204ENST00000586558 PCYOX1LQ8NBM8 494 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 CCDC197Q8NCU1 140 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 PNPT1Q8TCS8 783 aaKnown RBP17.58■□□□□ 0.4
DDX39A-204ENST00000586558 RNF138Q8WVD3 245 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 AURKBQ96GD4 344 aaPredicted RBP17.58■□□□□ 0.4
DDX39A-204ENST00000586558 LRRC37BQ96QE4 947 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 ANGPTL4Q9BY76 406 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 POLE3Q9NRF9 147 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 DEPPQ9NTK1 212 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 VAPAQ9P0L0 249 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 SLAMF8Q9P0V8 285 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.58■□□□□ 0.4
DDX39A-204ENST00000586558 RALYQ9UKM9 306 aaKnown RBP17.58■□□□□ 0.4
DDX39A-204ENST00000586558 LIPT1Q9Y234 373 aa17.58■□□□□ 0.4
DDX39A-204ENST00000586558 NUP214P35658 2090 aaPredicted RBP17.57■□□□□ 0.4
DDX39A-204ENST00000586558 LOC100653049A0A140TA62 436 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 HMGN4O00479 90 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 MRASO14807 208 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 ICOSLGO75144 302 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 KRT34O76011 436 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 GUSBP08236 651 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 OR12D1P0DN82 309 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 COX4I1P13073 169 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 MEOX1P50221 254 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 GPR85P60893 370 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 ARHGAP11BQ3KRB8 267 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.57■□□□□ 0.4
DDX39A-204ENST00000586558 PRAMEF20Q5VT98 475 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 REP15Q6BDI9 236 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 FIGNL1Q6PIW4 674 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 MTERF4Q7Z6M4 381 aaKnown RBP17.57■□□□□ 0.4
DDX39A-204ENST00000586558 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.57■□□□□ 0.4
DDX39A-204ENST00000586558 XAGE5Q8WWM1 108 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 NTNG2Q96CW9 530 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 CMTM5Q96DZ9 223 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 FRMD6Q96NE9 622 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 NODALQ96S42 347 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 CGREF1Q99674 301 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 DOHHQ9BU89 302 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 OSBPL11Q9BXB4 747 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 HHATLQ9HCP6 504 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 KLRF1Q9NZS2 232 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 BOKQ9UMX3 212 aaPredicted RBP17.57■□□□□ 0.4
DDX39A-204ENST00000586558 KCNE3Q9Y6H6 103 aa17.57■□□□□ 0.4
DDX39A-204ENST00000586558 EVPLLA8MZ36 301 aa17.56■□□□□ 0.4
DDX39A-204ENST00000586558 NDUFAB1O14561 156 aa17.56■□□□□ 0.4
DDX39A-204ENST00000586558 UNC5CO95185 931 aa17.56■□□□□ 0.4
DDX39A-204ENST00000586558 UTS2O95399 124 aa17.56■□□□□ 0.4
DDX39A-204ENST00000586558 C1QCP02747 245 aa17.56■□□□□ 0.4
DDX39A-204ENST00000586558 PRDX6P30041 224 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms