RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 STEAP2Q8NFT2 490 aa12.6□□□□□ -0.39
CSNK1D-224ENST00000584672 OR4N2Q8NGD1 307 aa12.6□□□□□ -0.39
CSNK1D-224ENST00000584672 GRK7Q8WTQ7 553 aa12.6□□□□□ -0.39
CSNK1D-224ENST00000584672 KLHL29Q96CT2 875 aa12.6□□□□□ -0.39
CSNK1D-224ENST00000584672 MRPL1Q9BYD6 325 aaKnown RBP12.6□□□□□ -0.39
CSNK1D-224ENST00000584672 C12orf65Q9H3J6 166 aaKnown RBP12.6□□□□□ -0.39
CSNK1D-224ENST00000584672 ZBTB26Q9HCK0 441 aa12.6□□□□□ -0.39
CSNK1D-224ENST00000584672 CISD1Q9NZ45 108 aaKnown RBP12.6□□□□□ -0.39
CSNK1D-224ENST00000584672 FLRT3Q9NZU0 649 aa12.6□□□□□ -0.39
CSNK1D-224ENST00000584672 XPR1Q9UBH6 696 aa12.6□□□□□ -0.39
CSNK1D-224ENST00000584672 PRODH2Q9UF12 536 aa12.6□□□□□ -0.39
CSNK1D-224ENST00000584672 KCNS2Q9ULS6 477 aa12.6□□□□□ -0.39
CSNK1D-224ENST00000584672 RNF11Q9Y3C5 154 aa12.6□□□□□ -0.39
CSNK1D-224ENST00000584672 PCDHGA11Q9Y5H2 935 aa12.6□□□□□ -0.39
CSNK1D-224ENST00000584672 GOLGA6L10A6NI86 522 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 CXCL13O43927 109 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 KIAA0513O60268 411 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 SIX3O95343 332 aaPredicted RBP12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 ATP1B1P05026 303 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 PGRP06401 933 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 CT45A8P0DMV1 189 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 CT45A9P0DMV2 189 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 EVI2BP34910 448 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 POU4F1Q01851 419 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 CT45A2Q5DJT8 189 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 CCNYL2Q5T2Q4 361 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 SLC48A1Q6P1K1 146 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 DTX2Q86UW9 622 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 OR52B6Q8NGF0 335 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 OR10D3Q8NH80 312 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 UBTD2Q8WUN7 234 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 KAT2AQ92830 837 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 TSPAN17Q96FV3 270 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 ADAD1Q96M93 576 aaKnown RBP12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 RTN4RQ9BZR6 473 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 EML4Q9HC35 981 aaKnown RBP12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 NGBQ9NPG2 151 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 PFDN4Q9NQP4 134 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 FBXO34Q9NWN3 711 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 WHRNQ9P202 907 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 CES1P1Q9UKY3 287 aa12.59□□□□□ -0.39
CSNK1D-224ENST00000584672 ELOA3DA6NLF2 546 aaPredicted RBP12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 DLX3O60479 287 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 GCM2O75603 506 aaPredicted RBP12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 TGP01266 2768 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 SLC25A16P16260 332 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 CSNK2A2P19784 350 aaPredicted RBP12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 AGTR1P30556 359 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 ARL1P40616 181 aaPredicted RBP12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 ALDH9A1P49189 494 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 ELOA3BQ3SY89 546 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 SH2D4BQ5SQS7 431 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 LIPJQ5W064 366 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 FAM166AQ6J272 317 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 MFSD12Q6NUT3 480 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 BHLHB9Q6PI77 547 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 SLC44A2Q8IWA5 706 aaPredicted RBP12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 FBXO36Q8NEA4 188 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 ELOA3Q8NG57 546 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 WDR20Q8TBZ3 569 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 RNF138Q8WVD3 245 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 FAM168AQ92567 244 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 C3orf49Q96BT1 292 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 C1GALT1C1Q96EU7 318 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 BTBD9Q96Q07 612 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 MCMBPQ9BTE3 642 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 ADAM19Q9H013 955 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 OR10A4Q9H209 315 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 MCTS1Q9ULC4 181 aaKnown RBP12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 PCDHA9Q9Y5H5 950 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 MGAM2Q2M2H8 2515 aa12.58□□□□□ -0.4
CSNK1D-224ENST00000584672 LOC100289279A0A1B0GTE1 492 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 SHISA9B4DS77 424 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 H0YIV9 168 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 LY6HO94772 140 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 SYNGR4O95473 234 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 FESP07332 822 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 TUBBP07437 444 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 STMN1P16949 149 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 ITGA2P17301 1181 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 HNF1AP20823 631 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 ADH6P28332 368 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 MAPK12P53778 367 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 PNLIPRP2P54317 469 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 DLG1Q12959 904 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 GGTLC2Q14390 218 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 STK11Q15831 433 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 AGAP6Q5VW22 663 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 SEZ6L2Q6UXD5 910 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 GALNT10Q86SR1 603 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 MARCH3Q86UD3 253 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 CCDC25Q86WR0 208 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 MEX3DQ86XN8 651 aaKnown RBP12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 TRIM58Q8NG06 486 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 UHMK1Q8TAS1 419 aaKnown RBP12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 STAG3L4Q8TBR4 150 aa12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 PIWIL2Q8TC59 973 aaKnown RBP12.57□□□□□ -0.4
CSNK1D-224ENST00000584672 DUSP19Q8WTR2 217 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms