RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 FHP07954 510 aa9.6□□□□□ -0.87
RFFL-212ENST00000584655 IFI30P13284 250 aa9.6□□□□□ -0.87
RFFL-212ENST00000584655 CD36P16671 472 aa9.6□□□□□ -0.87
RFFL-212ENST00000584655 CHMP24386 653 aa9.6□□□□□ -0.87
RFFL-212ENST00000584655 SH3BGRP55822 239 aaPredicted RBP9.6□□□□□ -0.87
RFFL-212ENST00000584655 RPS15AP62244 130 aaKnown RBP9.6□□□□□ -0.87
RFFL-212ENST00000584655 C19orf47Q8N9M1 422 aaKnown RBP9.6□□□□□ -0.87
RFFL-212ENST00000584655 HCAR2Q8TDS4 363 aa9.6□□□□□ -0.87
RFFL-212ENST00000584655 FUNDC2Q9BWH2 189 aa9.6□□□□□ -0.87
RFFL-212ENST00000584655 NPLQ9BXD5 320 aaPredicted RBP9.6□□□□□ -0.87
RFFL-212ENST00000584655 FN3KQ9H479 309 aa9.6□□□□□ -0.87
RFFL-212ENST00000584655 GAREM1Q9H706 876 aa9.6□□□□□ -0.87
RFFL-212ENST00000584655 PELI2Q9HAT8 420 aa9.6□□□□□ -0.87
RFFL-212ENST00000584655 BRD7Q9NPI1 651 aa9.6□□□□□ -0.87
RFFL-212ENST00000584655 ACER3Q9NUN7 267 aa9.6□□□□□ -0.87
RFFL-212ENST00000584655 USE1Q9NZ43 259 aa9.6□□□□□ -0.87
RFFL-212ENST00000584655 PAIP2BQ9ULR5 123 aaKnown RBP9.6□□□□□ -0.87
RFFL-212ENST00000584655 SLC6A5Q9Y345 797 aa9.6□□□□□ -0.87
RFFL-212ENST00000584655 AP1M2Q9Y6Q5 423 aa9.6□□□□□ -0.87
RFFL-212ENST00000584655 A0A0J9YY10 115 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 GUCY1B2O75343 617 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 ARAFP10398 606 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 CLUP10909 449 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 NAA10P41227 235 aaPredicted RBP9.59□□□□□ -0.87
RFFL-212ENST00000584655 NR0B1P51843 470 aaKnown RBP9.59□□□□□ -0.87
RFFL-212ENST00000584655 ARHGAP19Q14CB8 494 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 ZNF791Q3KP31 576 aaPredicted RBP9.59□□□□□ -0.87
RFFL-212ENST00000584655 MRPL2Q5T653 305 aaKnown RBP9.59□□□□□ -0.87
RFFL-212ENST00000584655 SPARTQ8N0X7 666 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 LRRC17Q8N6Y2 441 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 OR51Q1Q8NH59 317 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 LRR1Q96L50 414 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 DGAT2Q96PD7 388 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 PDE7BQ9NP56 450 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 SEMA4GQ9NTN9 838 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 PTTG2Q9NZH5 202 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 NCDNQ9UBB6 729 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 FBXL4Q9UKA2 621 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 DMTF1Q9Y222 760 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 ENPP4Q9Y6X5 453 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 PCNX2A6NKB5 2137 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 URADA6NGE7 173 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 RGS10O43665 173 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 BCL10O95999 233 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 NPPAP01160 153 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 OCM2P0CE71 109 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 OCMP0CE72 109 aaPredicted RBP9.59□□□□□ -0.87
RFFL-212ENST00000584655 MYF6P23409 242 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 CRHBPP24387 322 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 PCGF2P35227 344 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 ZNF658BQ4V348 819 aaPredicted RBP9.59□□□□□ -0.87
RFFL-212ENST00000584655 LIPKQ5VXJ0 399 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 LYPD4Q6UWN0 246 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 USP30Q70CQ3 517 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 PRICKLE2Q7Z3G6 844 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 VWA5B2Q8N398 1253 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 SRFBP1Q8NEF9 429 aaKnown RBP9.59□□□□□ -0.87
RFFL-212ENST00000584655 BBS1Q8NFJ9 593 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 OR4C3Q8NH37 302 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 ZNF563Q8TA94 476 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 SAMD8Q96LT4 415 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 KLHDC3Q9BQ90 382 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 OR51E2Q9H255 320 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 DDX31Q9H8H2 851 aaKnown RBP9.59□□□□□ -0.87
RFFL-212ENST00000584655 FLRT3Q9NZU0 649 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 NDUFA13Q9P0J0 144 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 C17orf105B2RV13 164 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 EMC8O43402 210 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 TMED10P49755 219 aaKnown RBP9.59□□□□□ -0.87
RFFL-212ENST00000584655 EIF2B2P49770 351 aaKnown RBP9.59□□□□□ -0.87
RFFL-212ENST00000584655 KHKP50053 298 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 SPCS2Q15005 226 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 ACSM5Q6NUN0 579 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 SYT13Q7L8C5 426 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 BTLAQ7Z6A9 289 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 PEX5LQ8IYB4 626 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 ENTHD1Q8IYW4 607 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 LNX2Q8N448 690 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 MFSD9Q8NBP5 474 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 OR4F15Q8NGB8 312 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 OR51G2Q8NGK0 314 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 OR6K6Q8NGW6 343 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 RAB11FIP5Q9BXF6 653 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 WASH6PQ9NQA3 447 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 FGF21Q9NSA1 209 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 ZNF229Q9UJW7 825 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 BLOC1S6Q9UL45 172 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 VDAC3Q9Y277 283 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 DMXL2Q8TDJ6 3036 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 MFN2O95140 757 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 CDK4P11802 303 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 PPIBP23284 216 aaKnown RBP9.59□□□□□ -0.87
RFFL-212ENST00000584655 HSD17B2P37059 387 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 RPL3P39023 403 aaKnown RBP9.59□□□□□ -0.87
RFFL-212ENST00000584655 HNRNPKP61978 463 aaKnown RBP eCLIP9.59□□□□□ -0.871e-7■■□□□ 14.5
RFFL-212ENST00000584655 TXNL4AP83876 142 aaKnown RBP9.59□□□□□ -0.87
RFFL-212ENST00000584655 TSTQ16762 297 aaKnown RBP9.59□□□□□ -0.87
RFFL-212ENST00000584655 ENTPD8Q5MY95 495 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 HLA-DQA1Q5Y7H0 255 aa9.59□□□□□ -0.87
RFFL-212ENST00000584655 BICRALQ6AI39 1079 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms