RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 GLYATL2Q8WU03 294 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 AUTS2Q8WXX7 1259 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 PTCHD1Q96NR3 888 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 OR14A2Q96R54 314 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 PRRT1Q99946 306 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 PELI2Q9HAT8 420 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 IL37Q9NZH6 218 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 PCDHA9Q9Y5H5 950 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 OR5K4A6NMS3 321 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 CASP3P42574 277 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 VSX2P58304 361 aaPredicted RBP12.37□□□□□ -0.43
RNF43-208ENST00000584437 FAM189BP81408 668 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 PLCXD2Q0VAA5 305 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 LMAN2Q12907 356 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 RIN1Q13671 783 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 PEA15Q15121 130 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 ZNF792Q3KQV3 632 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 C14orf28Q4W4Y0 310 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 RNF111Q6ZNA4 994 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 B3GNT8Q7Z7M8 397 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 DAZLQ92904 295 aaKnown RBP12.37□□□□□ -0.43
RNF43-208ENST00000584437 FIZ1Q96SL8 496 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 DPH7Q9BTV6 452 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 STRA6Q9BX79 667 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 GPR45Q9Y5Y3 372 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 ZNF736B4DX44 427 aaPredicted RBP12.37□□□□□ -0.43
RNF43-208ENST00000584437 INPPL1O15357 1258 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 B4GAT1O43505 415 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 SLC34A2O95436 690 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 WDR5P61964 334 aaKnown RBP12.37□□□□□ -0.43
RNF43-208ENST00000584437 METTL4Q8N3J2 472 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 ELP4Q96EB1 424 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 ABRACLQ9P1F3 81 aa12.37□□□□□ -0.43
RNF43-208ENST00000584437 C2orf78A6NCI8 922 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 TSTD3H0UI37 97 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 AQP9O43315 295 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 GM2AP17900 193 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 MMP12P39900 470 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 CSNK2A1P68400 391 aaPredicted RBP12.36□□□□□ -0.43
RNF43-208ENST00000584437 DYRK1AQ13627 763 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 AWAT2Q6E213 333 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 SGPP2Q8IWX5 399 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 SVBPQ8N300 66 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 CSNK2A3Q8NEV1 391 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 OR56B2PQ8NGI1 322 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 TNFRSF1BP20333 461 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 CD68P34810 354 aaPredicted RBP12.36□□□□□ -0.43
RNF43-208ENST00000584437 TAS2R20P59543 309 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 PTPRRQ15256 657 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 CNKSR3Q6P9H4 555 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 ZNF704Q6ZNC4 412 aaPredicted RBP12.36□□□□□ -0.43
RNF43-208ENST00000584437 ZNF551Q7Z340 670 aaPredicted RBP12.36□□□□□ -0.43
RNF43-208ENST00000584437 HMGN2P46Q86SG4 172 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 ADAMTS16Q8TE57 1224 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 C2orf42Q9NWW7 574 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 KRBOX1C9JBD0 128 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 TRAPPC6AO75865 159 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 SOD2P04179 222 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 MGAT3Q09327 533 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 PGM2L1Q6PCE3 622 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 TPRA1Q86W33 373 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 SLC22A8Q8TCC7 542 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 SFXN5Q8TD22 340 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 SAMD11Q96NU1 681 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 TLR9Q9NR96 1032 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 ATG4BQ9Y4P1 393 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 FAM230AA0A1W2PPH8 454 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 CHATP28329 748 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 CD99L2Q8TCZ2 262 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 SPRYD4Q8WW59 207 aaPredicted RBP12.36□□□□□ -0.43
RNF43-208ENST00000584437 GTF2H4Q92759 462 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 LMF1Q96S06 567 aa12.36□□□□□ -0.43
RNF43-208ENST00000584437 APBB3O95704 486 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 EGFP01133 1207 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 RBMS1P29558 406 aaKnown RBP12.35□□□□□ -0.43
RNF43-208ENST00000584437 RPS21P63220 83 aaKnown RBP12.35□□□□□ -0.43
RNF43-208ENST00000584437 TEAD2Q15562 447 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 CD200R1Q8TD46 325 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 CIDECQ96AQ7 238 aaPredicted RBP12.35□□□□□ -0.43
RNF43-208ENST00000584437 SCLYQ96I15 445 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 AK6Q9Y3D8 172 aaKnown RBP12.35□□□□□ -0.43
RNF43-208ENST00000584437 MYH10P35580 1976 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 OR6C6A6NF89 314 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 RTCAO00442 366 aaKnown RBP12.35□□□□□ -0.43
RNF43-208ENST00000584437 HLA-EP13747 358 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 BPIP17213 487 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 SSTR4P31391 388 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 AKR1C2P52895 323 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 CTXN1P60606 82 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 GBX1Q14549 363 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 ACSM3Q53FZ2 586 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 TMEM164Q5U3C3 297 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 CBLL1Q75N03 491 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 GPRIN1Q7Z2K8 1008 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 SNX18Q96RF0 628 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 EMCNQ9ULC0 261 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 LOC102723532A0A0G2JNH3 316 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 PPP1R3DO95685 299 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 HEXBP07686 556 aa12.35□□□□□ -0.43
RNF43-208ENST00000584437 HOXB2P14652 356 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms