RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 PHF3Q92576 2039 aaKnown RBP2.78□□□□□ -1.96
CCDC178-213ENST00000583930 LOC105369274A0A096LPK9 316 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 LOC102723532A0A0G2JNH3 316 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 PRSS51A0A1B0GVH4 220 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 WIPF3A6NGB9 483 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 ANKDD1BA6NHY2 528 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 TMEM150CB9EJG8 249 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 PIP5K1BO14986 540 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 EMC8O43402 210 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 TLX3O43711 291 aaPredicted RBP2.78□□□□□ -1.96
CCDC178-213ENST00000583930 AHCYL1O43865 530 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 PCDH7O60245 1069 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 NME2P1O60361 137 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 CCNT2O60583 730 aaKnown RBP2.78□□□□□ -1.96
CCDC178-213ENST00000583930 OR2B3O76000 313 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 OR4F21O95013 312 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 LYPD3O95274 346 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 GFAPP14136 432 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 NT5EP21589 574 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 CDH3P22223 829 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 CHMP24386 653 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 TLX1P31314 330 aaPredicted RBP2.78□□□□□ -1.96
CCDC178-213ENST00000583930 PRKAR1BP31321 381 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 PTGER4P35408 488 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 EMDP50402 254 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 HLCSP50747 726 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 HMGA2P52926 109 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 ATXN3P54252 364 aaPredicted RBP2.78□□□□□ -1.96
CCDC178-213ENST00000583930 SLC26A5P58743 744 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 RPS13P62277 151 aaKnown RBP2.78□□□□□ -1.96
CCDC178-213ENST00000583930 LINC00303Q3SY05 128 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 FBXL19-AS1Q494R0 122 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 IQCCQ4KMZ1 466 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 ATP6AP1LQ52LC2 224 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 HHATQ5VTY9 493 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 LCN8Q6JVE9 175 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 DOK6Q6PKX4 331 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 CYP20A1Q6UW02 462 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 PCSK4Q6UW60 755 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 NHLRC1Q6VVB1 395 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 DGLUCYQ7Z3D6 616 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 MSRB3Q8IXL7 192 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 OR4N4Q8N0Y3 316 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 LRRC25Q8N386 305 aaPredicted RBP2.78□□□□□ -1.96
CCDC178-213ENST00000583930 CLDN22Q8N7P3 220 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 RNF152Q8N8N0 203 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 CDRT4Q8N9R6 151 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 BBS10Q8TAM1 723 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 LRRC8CQ8TDW0 803 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 PATE1Q8WXA2 126 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 ZBED6CLQ96FA7 236 aaPredicted RBP2.78□□□□□ -1.96
CCDC178-213ENST00000583930 REXO5Q96IC2 774 aaKnown RBP2.78□□□□□ -1.96
CCDC178-213ENST00000583930 ITCHQ96J02 903 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 ZNF354BQ96LW1 612 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 C3orf30Q96M34 536 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 SH3GL1Q99961 368 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 VN1R1Q9GZP7 353 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 LRMDAQ9H2I8 198 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 SLC35C2Q9NQQ7 365 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 HEY2Q9UBP5 337 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 FARSAQ9Y285 508 aaKnown RBP2.78□□□□□ -1.96
CCDC178-213ENST00000583930 ANKRD12Q6UB98 2062 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 ABCA7Q8IZY2 2146 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 TANC2Q9HCD6 1990 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 A0A0G2JPF8 293 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 PRSS29PA6NIE9 313 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 DUXAA6NLW8 204 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 HNRNPCL2B2RXH8 293 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 HNRNPCL3B7ZW38 293 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 C9J4A7 227 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 F2RL2O00254 374 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 POLR1CO15160 346 aaPredicted RBP2.78□□□□□ -1.96
CCDC178-213ENST00000583930 CHST10O43529 356 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 HCRTR1O43613 425 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 MYO1DO94832 1006 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 CNOT4O95628 575 aaKnown RBP2.78□□□□□ -1.96
CCDC178-213ENST00000583930 CRHP06850 196 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 ALOX5P09917 674 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 HNRNPCL4P0DMR1 293 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 TROVE2P10155 538 aaKnown RBP eCLIP2.78□□□□□ -1.96
CCDC178-213ENST00000583930 PEPDP12955 493 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 PORP16435 677 aaPredicted RBP2.78□□□□□ -1.96
CCDC178-213ENST00000583930 BGNP21810 368 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 PSMA4P25789 261 aaKnown RBP2.78□□□□□ -1.96
CCDC178-213ENST00000583930 PSMB5P28074 263 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 PIGAP37287 484 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 RBM34P42696 430 aaKnown RBP2.78□□□□□ -1.96
CCDC178-213ENST00000583930 CCR10P46092 362 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 NOVA1P51513 510 aaKnown RBP2.78□□□□□ -1.96
CCDC178-213ENST00000583930 MNAT1P51948 309 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 SUCLG1P53597 346 aaKnown RBP2.78□□□□□ -1.96
CCDC178-213ENST00000583930 NAGLUP54802 743 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 FOXA1P55317 472 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 RAP2BP61225 183 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 PPP1CAP62136 330 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 NKX6-1P78426 367 aaPredicted RBP2.78□□□□□ -1.96
CCDC178-213ENST00000583930 PLIN5Q00G26 463 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 BNIP1Q12981 228 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 BNIP2Q12982 314 aa2.78□□□□□ -1.96
CCDC178-213ENST00000583930 EBPQ15125 230 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms