RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 RNF111Q6ZNA4 994 aa12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 CALHM3Q86XJ0 350 aa12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 MSRB3Q8IXL7 192 aa12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 CCDC116Q8IYX3 515 aa12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 APCDD1LQ8NCL9 501 aa12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 C11orf65Q8NCR3 313 aa12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 FDCSPQ8NFU4 85 aa12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 OR5L2Q8NGL0 311 aa12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 OR8K3Q8NH51 312 aa12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 BRIX1Q8TDN6 353 aaKnown RBP12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 CANT1Q8WVQ1 401 aa12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 ZNF354BQ96LW1 612 aa12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 AMDHD1Q96NU7 426 aa12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 INPP5KQ9BT40 448 aa12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 C9orf16Q9BUW7 83 aa12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 EPS8L2Q9H6S3 715 aa12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 MAT2BQ9NZL9 334 aa12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 BAG5Q9UL15 447 aa12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 ERVK-19Q9WJR5 959 aa12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 CFL2Q9Y281 166 aa12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 ZNF451Q9Y4E5 1061 aa12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 ICE1Q9Y2F5 2266 aa12.5□□□□□ -0.41
CSNK1D-220ENST00000581737 CPAMD8Q8IZJ3 1885 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 A0A1W2PS29 197 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 MASP2O00187 686 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 CDK2AP1O14519 115 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 PRAMEF2O60811 474 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 IGKV3-11P04433 115 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 GSNP06396 782 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 CELA2AP08217 269 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 PEX2P28328 305 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 PTPN6P29350 595 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 GPC1P35052 558 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 GPR143P51810 404 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 MANFP55145 182 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 PHC1P78364 1004 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 FUT7Q11130 342 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 ELOAQ14241 798 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 SELPLGQ14242 412 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 MLC1Q15049 377 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 VMACQ2NL98 169 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 PRICKLE4Q2TBC4 344 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 SPDYE7PQ495Y7 208 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 ZNF385BQ569K4 471 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 ZNF628Q5EBL2 1059 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 GCNT6Q5T4J0 391 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 TCTN3Q6NUS6 607 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 H3F3CQ6NXT2 135 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 ISLR2Q6UXK2 745 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 DGAT2L6Q6ZPD8 337 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 SLC29A4Q7RTT9 530 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 ADGRG5Q8IZF4 528 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 CLECL1Q8IZS7 167 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 ANKFN1Q8N957 763 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 TEX19Q8NA77 164 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 PAPD5Q8NDF8 572 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 OR52N2Q8NGI0 321 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 OR9A2Q8NGT5 310 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 SUN3Q8TAQ9 357 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 ZNF721Q8TF20 911 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 NRG4Q8WWG1 115 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 CENPNQ96H22 339 aaPredicted RBP12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 SMAD5Q99717 465 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 SLC35A5Q9BS91 424 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 PTGFRNQ9P2B2 879 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 FAF1Q9UNN5 650 aaPredicted RBP12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 ANGPT4Q9Y264 503 aa12.49□□□□□ -0.41
CSNK1D-220ENST00000581737 A0A087WV62 115 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 TCRBV5S2A0A599 114 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 PLOD2O00469 737 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 PLOD3O60568 738 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 COQ9O75208 318 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 C6orf47O95873 294 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 BMP2P12643 396 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 NCK1P16333 377 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 PCGF2P35227 344 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 SOX11P35716 441 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 FRKP42685 505 aaPredicted RBP12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 CDKN2CP42773 168 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 PRIM2P49643 509 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 DUSP2Q05923 314 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 MFAP5Q13361 173 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 RAPSNQ13702 412 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 GNA13Q14344 377 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 LTB4RQ15722 352 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 MEP1AQ16819 746 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 ZNF630Q2M218 657 aaPredicted RBP12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 GTDC1Q4AE62 458 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 FAM180BQ6P0A1 224 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 ASB18Q6ZVZ8 466 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 ARMC10Q8N2F6 343 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 SIRT6Q8N6T7 355 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 NUBPLQ8TB37 319 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 ZFP90Q8TF47 636 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 LZICQ8WZA0 190 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 PSMF1Q92530 271 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 CIDECQ96AQ7 238 aaPredicted RBP12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 CTHRC1Q96CG8 243 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 SLC47A1Q96FL8 570 aa12.48□□□□□ -0.41
CSNK1D-220ENST00000581737 LMF1Q96S06 567 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms