RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 C11orf24Q96F05 449 aaPredicted RBP3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 ELMO2Q96JJ3 720 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 C9orf85Q96MD7 179 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 VSTM2LQ96N03 204 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 RANBP9Q96S59 729 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 APOL2Q9BQE5 337 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 FICDQ9BVA6 458 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 IMPAD1Q9NX62 359 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 CHMP2BQ9UQN3 213 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 NTNG1Q9Y2I2 539 aa3.61□□□□□ -1.83
SMCHD1-205ENST00000581383 A0A087WZY1 265 aa3.6□□□□□ -1.83
SMCHD1-205ENST00000581383 TRBV7-9A0A0J9YWB2 115 aa3.6□□□□□ -1.83
SMCHD1-205ENST00000581383 ZSCAN5CA6NGD5 496 aaPredicted RBP3.6□□□□□ -1.83
SMCHD1-205ENST00000581383 LCMT2O60294 686 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-205ENST00000581383 IGFBP1P08833 259 aaPredicted RBP3.6□□□□□ -1.83
SMCHD1-205ENST00000581383 UQCRBP14927 111 aa3.6□□□□□ -1.83
SMCHD1-205ENST00000581383 DPP4P27487 766 aa3.6□□□□□ -1.83
SMCHD1-205ENST00000581383 AXLP30530 894 aa3.6□□□□□ -1.83
SMCHD1-205ENST00000581383 CYLC1P35663 651 aaPredicted RBP3.6□□□□□ -1.83
SMCHD1-205ENST00000581383 TRPC1P48995 793 aa3.6□□□□□ -1.83
SMCHD1-205ENST00000581383 RPS6P62753 249 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-205ENST00000581383 CDKN3Q16667 212 aa3.6□□□□□ -1.83
SMCHD1-205ENST00000581383 LHFPL4Q7Z7J7 247 aa3.6□□□□□ -1.83
SMCHD1-205ENST00000581383 ERICH1Q86X53 443 aa3.6□□□□□ -1.83
SMCHD1-205ENST00000581383 ERC1Q8IUD2 1116 aa3.6□□□□□ -1.83
SMCHD1-205ENST00000581383 SLC39A11Q8N1S5 342 aa3.6□□□□□ -1.83
SMCHD1-205ENST00000581383 TYMSOSQ8TAI1 123 aa3.6□□□□□ -1.83
SMCHD1-205ENST00000581383 COQ10BQ9H8M1 238 aa3.6□□□□□ -1.83
SMCHD1-205ENST00000581383 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.6□□□□□ -1.83
SMCHD1-205ENST00000581383 FAM120CQ9NX05 1096 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-205ENST00000581383 EXOSC1Q9Y3B2 195 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-205ENST00000581383 WASHC1A8K0Z3 465 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 PPIHO43447 177 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 OR4F21O95013 312 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 DESP17661 470 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 PAX2Q02962 417 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 PEX6Q13608 980 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 TIMM50Q3ZCQ8 353 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 DNAJC21Q5F1R6 531 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 ZNF774Q6NX45 483 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 AFTPHQ6ULP2 937 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 PARGQ86W56 976 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 CDC20BQ86Y33 519 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 HPS6Q86YV9 775 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 CBWD2Q8IUF1 395 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 GCNT2Q8N0V5 402 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 VN1R17PQ8TDU5 208 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 HPDLQ96IR7 371 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 TBCDQ9BTW9 1192 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 TBC1D10AQ9BXI6 508 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 GPN2Q9H9Y4 310 aaPredicted RBP3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 LPAR2Q9HBW0 351 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 MEPEQ9NQ76 525 aaPredicted RBP3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 UTP6Q9NYH9 597 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 RSPH14Q9UHP6 348 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 U3KQV3 271 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 GRIN2DO15399 1336 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 METP08581 1390 aa3.59□□□□□ -1.83
SMCHD1-205ENST00000581383 A0A1B0GUL7 405 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 LRRC30A6NM36 301 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 G3V3Y1 287 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 SDHDO14521 159 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 TM9SF1O15321 606 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 CLDN3O15551 220 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 BCL2L11O43521 198 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 MBD3O95983 291 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 JCHAINP01591 159 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 PTMAP06454 111 aaKnown RBP3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 THRBP10828 461 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 LAMP1P11279 417 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 SDC1P18827 310 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 TNNI3P19429 210 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 IGFBP5P24593 272 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 HPDP32754 393 aaPredicted RBP3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 ACVR1BP36896 505 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 MDH1P40925 334 aaKnown RBP3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 OR1D4P47884 311 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 NAPAP54920 295 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 OSTNP61366 133 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 NUCB2P80303 420 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 IL18R1Q13478 541 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 LGSNQ5TDP6 509 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 RNLSQ5VYX0 342 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 SERINC5Q86VE9 423 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 STKLD1Q8NE28 680 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 UPRTQ96BW1 309 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 DHTKD1Q96HY7 919 aaPredicted RBP3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 VPS35Q96QK1 796 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 TESK2Q96S53 571 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 THUMPD2Q9BTF0 503 aaKnown RBP3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 HCAR1Q9BXC0 346 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 NFKBIZQ9BYH8 718 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 AGPAT5Q9NUQ2 364 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 RBM28Q9NW13 759 aaKnown RBP3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 ELOVL2Q9NXB9 296 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 DUSP12Q9UNI6 340 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 MFHAS1Q9Y4C4 1052 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 AP4B1Q9Y6B7 739 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 CCDC7Q96M83 1385 aa3.58□□□□□ -1.84
SMCHD1-205ENST00000581383 POGZQ7Z3K3 1410 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms