RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	ZNF443	Q9Y2A4	671 aa	Predicted RBP	9.25	□□□□□ -0.93
TRIM16-222	ENST00000581224	PCDHGB2	Q9Y5G2	931 aa		9.25	□□□□□ -0.93
TRIM16-222	ENST00000581224	HEMK1	Q9Y5R4	338 aa	Predicted RBP	9.25	□□□□□ -0.93
TRIM16-222	ENST00000581224	RALGAPA1	Q6GYQ0	2036 aa		9.25	□□□□□ -0.93
TRIM16-222	ENST00000581224	SDK1	Q7Z5N4	2213 aa		9.25	□□□□□ -0.93
TRIM16-222	ENST00000581224	USP34	Q70CQ2	3546 aa		9.25	□□□□□ -0.93
TRIM16-222	ENST00000581224	NUP210L	Q5VU65	1888 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	SH3PXD2B	A1X283	911 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	EIF4E1B	A6NMX2	242 aa	Known RBP	9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	SNTN	A6NMZ2	147 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	ARHGAP33	O14559	1287 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	POLR1C	O15160	346 aa	Predicted RBP	9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	KIAA0513	O60268	411 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	BRINP1	O60477	761 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	NME6	O75414	186 aa	Predicted RBP	9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	CYP7B1	O75881	506 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	JUNB	P17275	347 aa	Predicted RBP	9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	TNFRSF1B	P20333	461 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	RPS4Y1	P22090	263 aa	Known RBP	9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	ALAS2	P22557	587 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	ELAVL4	P26378	380 aa	Known RBP	9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	GABRA3	P34903	492 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	RORA	P35398	523 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	KRT20	P35900	424 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	ALDH3B2	P48448	385 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	SEPHS1	P49903	392 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	CRISP1	P54107	249 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	CD47	Q08722	323 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	FUT5	Q11128	374 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	PPP1R8	Q12972	351 aa	Known RBP	9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	ELAVL1	Q15717	326 aa	Known RBP	9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	DECR1	Q16698	335 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	TMEM44	Q2T9K0	475 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	TYW3	Q6IPR3	259 aa	Known RBP	9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	FRRS1	Q6ZNA5	592 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	ZNF550	Q7Z398	422 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	DGLUCY	Q7Z3D6	616 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	GRAMD2A	Q8IUY3	354 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	CDK20	Q8IZL9	346 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	ZNF527	Q8NB42	609 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	AQP11	Q8NBQ7	271 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	OR52R1	Q8NGF1	315 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	OR52J3	Q8NH60	311 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	OR14A16	Q8NHC5	309 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	ZNF420	Q8TAQ5	688 aa	Predicted RBP	9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	GNPDA2	Q8TDQ7	276 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	MYDGF	Q969H8	173 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	HS6ST2	Q96MM7	605 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	PTCHD1	Q96NR3	888 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	NODAL	Q96S42	347 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	MYCBP	Q99417	103 aa	Predicted RBP	9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	ZNF559	Q9BR84	538 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	YIPF2	Q9BWQ6	316 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	TGIF2	Q9GZN2	237 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	LRRN3	Q9H3W5	708 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	FOLH1B	Q9HBA9	442 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	CAPN10	Q9HC96	672 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	HHATL	Q9HCP6	504 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	TMEM74B	Q9NUR3	256 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	A4GNT	Q9UNA3	340 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	PCDHGB1	Q9Y5G3	927 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	PCDHGA5	Q9Y5G8	931 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	PCDHGA10	Q9Y5H3	936 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	CLCA3P	Q9Y6N3	262 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	COMMD3-BMI1	R4GMX3	469 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	DMD	P11532	3685 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	SCN2A	Q99250	2005 aa		9.24	□□□□□ -0.93
TRIM16-222	ENST00000581224	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	UNC13C	Q8NB66	2214 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	CPED1	A4D0V7	1026 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	CCDC160	A6NGH7	325 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	PRAMEF25	A6NGN4	478 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	OR6C76	A6NM76	312 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224		E9PQ18	207 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224		H3BMH7	237 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224		M0R3G1	203 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	SLC1A7	O00341	560 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	PCDH17	O14917	1159 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	HCRTR1	O43613	425 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	SIGLEC6	O43699	453 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	CBX7	O95931	251 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	CD63	P08962	238 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	LINGO3	P0C6S8	592 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	CKMT1A	P12532	417 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	S1PR1	P21453	382 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	PIGA	P37287	484 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	PPIC	P45877	212 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	YAP1	P46937	504 aa	Known RBP	9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	GCGR	P47871	477 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	CLK3	P49761	638 aa	Known RBP	9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	PDX1	P52945	283 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	DAB2	P98082	770 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	BNC1	Q01954	994 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	ID2	Q02363	134 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	OCA2	Q04671	838 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	RAPSN	Q13702	412 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	ZNF267	Q14586	743 aa	Predicted RBP	9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	IL11RA	Q14626	422 aa		9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	GANAB	Q14697	944 aa	Known RBP	9.23	□□□□□ -0.93
TRIM16-222	ENST00000581224	MAD2L1BP	Q15013	274 aa	Predicted RBP	9.23	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms