RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 RAB8BQ92930 207 aa13.18□□□□□ -0.3
SKA2-205ENST00000580541 TMBIM1Q969X1 311 aa13.18□□□□□ -0.3
SKA2-205ENST00000580541 TMEM125Q96AQ2 219 aa13.18□□□□□ -0.3
SKA2-205ENST00000580541 SPACA9Q96E40 222 aaPredicted RBP13.18□□□□□ -0.3
SKA2-205ENST00000580541 OMA1Q96E52 524 aa13.18□□□□□ -0.3
SKA2-205ENST00000580541 REXO5Q96IC2 774 aaKnown RBP13.18□□□□□ -0.3
SKA2-205ENST00000580541 SECISBP2Q96T21 854 aaKnown RBP13.18□□□□□ -0.3
SKA2-205ENST00000580541 CDRT15Q96T59 188 aa13.18□□□□□ -0.3
SKA2-205ENST00000580541 SDF2Q99470 211 aa13.18□□□□□ -0.3
SKA2-205ENST00000580541 SMAD5Q99717 465 aaKnown RBP13.18□□□□□ -0.3
SKA2-205ENST00000580541 SPATA5L1Q9BVQ7 753 aa13.18□□□□□ -0.3
SKA2-205ENST00000580541 ADNPQ9H2P0 1102 aa13.18□□□□□ -0.3
SKA2-205ENST00000580541 MMADHCQ9H3L0 296 aaPredicted RBP13.18□□□□□ -0.3
SKA2-205ENST00000580541 ZBTB20Q9HC78 741 aaPredicted RBP13.18□□□□□ -0.3
SKA2-205ENST00000580541 TMEM181Q9P2C4 612 aa13.18□□□□□ -0.3
SKA2-205ENST00000580541 TUBD1Q9UJT1 453 aa13.18□□□□□ -0.3
SKA2-205ENST00000580541 ANGPT4Q9Y264 503 aa13.18□□□□□ -0.3
SKA2-205ENST00000580541 ANKRD11Q6UB99 2663 aaPredicted RBP13.18□□□□□ -0.3
SKA2-205ENST00000580541 CHD8Q9HCK8 2581 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 GSTA4O15217 222 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 SERPINB7O75635 380 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 PDE9AO76083 593 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 STAMBPO95630 424 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 IFNA14P01570 189 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 TFPTP0C1Z6 253 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 CPOXP36551 454 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 RFX3P48380 749 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 ARG2P78540 354 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 CDK6Q00534 326 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 LIPEQ05469 1076 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 VEZF1Q14119 521 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 NNATQ16517 81 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 NTRK2Q16620 822 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 AP1ARQ63HQ0 302 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 B3GNTL1Q67FW5 361 aaPredicted RBP13.17□□□□□ -0.3
SKA2-205ENST00000580541 IL20RBQ6UXL0 311 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 NPSR1Q6W5P4 371 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 RTL4Q6ZR62 310 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 LINC00696Q6ZRV3 163 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 RINLQ6ZS11 566 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 NET1Q7Z628 596 aaPredicted RBP13.17□□□□□ -0.3
SKA2-205ENST00000580541 BEST3Q8N1M1 668 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 GOLM1Q8NBJ4 401 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 SLC38A5Q8WUX1 472 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 MCUR1Q96AQ8 359 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 ZNF607Q96SK3 696 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 ADOQ96SZ5 270 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 KCTD14Q9BQ13 255 aaPredicted RBP13.17□□□□□ -0.3
SKA2-205ENST00000580541 ALG2Q9H553 416 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 PRORYQ9H606 182 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 ARMC7Q9H6L4 198 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 TIMMDC1Q9NPL8 285 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 UBQLN4Q9NRR5 601 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 CNIH4Q9P003 139 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 ABCD2Q9UBJ2 740 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 ZNF232Q9UNY5 417 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 WDR45Q9Y484 360 aa13.17□□□□□ -0.3
SKA2-205ENST00000580541 ASPMQ8IZT6 3477 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 ACACBO00763 2458 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 GXYLT2A0PJZ3 443 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 ELOVL7A1L3X0 281 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 OR5H15A6NDH6 313 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 FAM220BPB1ANY3 271 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 H3BNH8 94 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 TSPAN2O60636 221 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 NME6O75414 186 aaPredicted RBP13.16□□□□□ -0.3
SKA2-205ENST00000580541 DNAJC8O75937 253 aaPredicted RBP13.16□□□□□ -0.3
SKA2-205ENST00000580541 NADKO95544 446 aaPredicted RBP13.16□□□□□ -0.3
SKA2-205ENST00000580541 ARAFP10398 606 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 SOX3P41225 446 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 POLE2P56282 527 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 RAPSNQ13702 412 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 SCARB2Q14108 478 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 ZSWIM7Q19AV6 140 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 VMACQ2NL98 169 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 ZNF791Q3KP31 576 aaPredicted RBP13.16□□□□□ -0.3
SKA2-205ENST00000580541 FLYWCH1Q4VC44 716 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 LACTB2Q53H82 288 aaPredicted RBP13.16□□□□□ -0.3
SKA2-205ENST00000580541 TBCELQ5QJ74 424 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 SLC22A10Q63ZE4 541 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 FIGNL1Q6PIW4 674 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 IGFL2Q6UWQ7 119 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 IGFL3Q6UXB1 125 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 IFNEQ86WN2 208 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 CALHM3Q86XJ0 350 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 PEX5LQ8IYB4 626 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 CYP4Z2PQ8N1L4 340 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 FAM13CQ8NE31 585 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 HIPK4Q8NE63 616 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 BHLHE22Q8NFJ8 381 aaPredicted RBP13.16□□□□□ -0.3
SKA2-205ENST00000580541 OR4N2Q8NGD1 307 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 BBS10Q8TAM1 723 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 SPPL2AQ8TCT8 520 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 EXTL1Q92935 676 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 DTNBP1Q96EV8 351 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 ZNF583Q96ND8 569 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 CNTNAP3BQ96NU0 1288 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 CNTNAP3Q9BZ76 1288 aa13.16□□□□□ -0.3
SKA2-205ENST00000580541 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.16□□□□□ -0.3
SKA2-205ENST00000580541 SERHL2Q9H4I8 314 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms