RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 NR2F1P10589 423 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 ETFAP13804 333 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 GPX2P18283 190 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 SLC6A2P23975 617 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 SOX3P41225 446 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 MAP3K8P41279 467 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 RFX3P48380 749 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 MAN2A2P49641 1150 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 CRISP3P54108 245 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 CASP9P55211 416 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 MTPNP58546 118 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 RBBP4Q09028 425 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 KCNAB2Q13303 367 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 ZNF630Q2M218 657 aaPredicted RBP10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 ARHGAP11BQ3KRB8 267 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 EXOSC6Q5RKV6 272 aaKnown RBP10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 DCST2Q5T1A1 773 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 B3GNTL1Q67FW5 361 aaPredicted RBP10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 C8orf82Q6P1X6 216 aaPredicted RBP10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 NPSR1Q6W5P4 371 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 RTL4Q6ZR62 310 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 NUP54Q7Z3B4 507 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 WDR53Q7Z5U6 358 aaPredicted RBP10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 CYP4Z2PQ8N1L4 340 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 ARHGAP24Q8N264 748 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 BCORP1Q8N888 145 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 ZNF527Q8NB42 609 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 FAM13CQ8NE31 585 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 PIK3R3Q92569 461 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 TTC9Q92623 222 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 DIO2Q92813 273 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 TMBIM1Q969X1 311 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 SPACA9Q96E40 222 aaPredicted RBP10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 DTNBP1Q96EV8 351 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 SLC35A4Q96G79 324 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 C5orf34Q96MH7 638 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 SECISBP2Q96T21 854 aaKnown RBP10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 GPATCH1Q9BRR8 931 aaKnown RBP10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 LIN28AQ9H9Z2 209 aaKnown RBP10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 TIMMDC1Q9NPL8 285 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 ADA2Q9NZK5 511 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 LRFN1Q9P244 771 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 ATMQ13315 3056 aa10.4□□□□□ -0.74
CDK5RAP3-210ENST00000578733 OR5H15A6NDH6 313 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 TMEM200CA6NKL6 621 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 FXYD1O00168 92 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 SLC28A2O43868 658 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 DPM1O60762 260 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 STX11O75558 287 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 KCNK2O95069 426 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 NADKO95544 446 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 GUSBP08236 651 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 FBXO45P0C2W1 286 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 BMP2P12643 396 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 HPGDP15428 266 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 CD46P15529 392 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 SLC7A2P52569 658 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 EEFSECP57772 596 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 BNIP1Q12981 228 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 NTRK2Q16620 822 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 SPATS1Q496A3 300 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 SAMD4BQ5PRF9 694 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 TBCELQ5QJ74 424 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 COX20Q5RI15 118 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 INTS11Q5TA45 600 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 PRAMEF8Q5VWM4 474 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 PRAMEF7Q5VXH5 474 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 HEPHL1Q6MZM0 1159 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 FIGNL1Q6PIW4 674 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 IGFL2Q6UWQ7 119 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 IL20RBQ6UXL0 311 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 LRRC74BQ6ZQY2 392 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 PRR22Q8IZ63 422 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 GOLM1Q8NBJ4 401 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 C11orf65Q8NCR3 313 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 CHDHQ8NE62 594 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 OR10A6Q8NH74 314 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 C9orf43Q8TAL5 461 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 BBS10Q8TAM1 723 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 OIT3Q8WWZ8 545 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 HAS2Q92819 552 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 PMM1Q92871 262 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 RAB8BQ92930 207 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 OTUB1Q96FW1 271 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 TRNT1Q96Q11 434 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 SLC39A3Q9BRY0 314 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 TMEM38AQ9H6F2 299 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 KAT8Q9H7Z6 458 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 ZBTB20Q9HC78 741 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 A4GALTQ9NPC4 353 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 CNIH4Q9P003 139 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 ANGPT4Q9Y264 503 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 WDR45Q9Y484 360 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 MYO18BQ8IUG5 2567 aa10.39□□□□□ -0.75
CDK5RAP3-210ENST00000578733 A0A0G2JPF8 293 aa10.38□□□□□ -0.75
CDK5RAP3-210ENST00000578733 GXYLT2A0PJZ3 443 aa10.38□□□□□ -0.75
CDK5RAP3-210ENST00000578733 FAM220BPB1ANY3 271 aa10.38□□□□□ -0.75
CDK5RAP3-210ENST00000578733 HNRNPCL2B2RXH8 293 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms