RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 OR6T1Q8NGN1 323 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 OR13F1Q8NGS4 319 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 OR51Q1Q8NH59 317 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 CNIH3Q8TBE1 160 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 RAB2BQ8WUD1 216 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 ACOT11Q8WXI4 607 aaPredicted RBP10.37□□□□□ -0.75
SKA2-204ENST00000578519 HS6ST2Q96MM7 605 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 ZNF559Q9BR84 538 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 SLC7A5P2Q9GIP4 190 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 RASSF1Q9NS23 344 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 UCKL1Q9NWZ5 548 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 CNOT2Q9NZN8 540 aaKnown RBP10.37□□□□□ -0.75
SKA2-204ENST00000578519 TESQ9UGI8 421 aaKnown RBP10.37□□□□□ -0.75
SKA2-204ENST00000578519 WARS2Q9UGM6 360 aaKnown RBP10.37□□□□□ -0.75
SKA2-204ENST00000578519 NDOR1Q9UHB4 597 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 MKLN1Q9UL63 735 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 RNF6Q9Y252 685 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 TMEM5Q9Y2B1 443 aa10.37□□□□□ -0.75
SKA2-204ENST00000578519 HEMK1Q9Y5R4 338 aaPredicted RBP10.37□□□□□ -0.75
SKA2-204ENST00000578519 MN1Q10571 1320 aaPredicted RBP10.36□□□□□ -0.75
SKA2-204ENST00000578519 CHD7Q9P2D1 2997 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 A0A1B0GTQ1 180 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 A0A1W2PS29 197 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 TRAPPC13A5PLN9 417 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 CLCA1A8K7I4 914 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 DSCR3O14972 297 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 KIAA0513O60268 411 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 BRINP1O60477 761 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 CNOT3O75175 753 aaKnown RBP10.36□□□□□ -0.75
SKA2-204ENST00000578519 SEC14L2O76054 403 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 RECKO95980 971 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 HBQ1P09105 142 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 POU2F1P14859 743 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 ENDOUP21128 410 aaKnown RBP10.36□□□□□ -0.75
SKA2-204ENST00000578519 AGXTP21549 392 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 ALAS2P22557 587 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 PAX7P23759 505 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 CHMP24386 653 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 EPHA8P29322 1005 aaPredicted RBP10.36□□□□□ -0.75
SKA2-204ENST00000578519 FMO3P31513 532 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 GFERP55789 205 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 DCAF7P61962 342 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 SNRPGP62308 76 aaKnown RBP10.36□□□□□ -0.75
SKA2-204ENST00000578519 SLC35A2P78381 396 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.36□□□□□ -0.75
SKA2-204ENST00000578519 MGAT2Q10469 447 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 BNIP3Q12983 259 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 TSPAN31Q12999 210 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 LSAMPQ13449 338 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 ZNF267Q14586 743 aaPredicted RBP10.36□□□□□ -0.75
SKA2-204ENST00000578519 FLYWCH1Q4VC44 716 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 ENTPD8Q5MY95 495 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 SLX4IPQ5VYV7 408 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 PGBD2Q6P3X8 592 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 KLHL17Q6TDP4 642 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 SLC35F3Q8IY50 421 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 SLC25A45Q8N413 288 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 Q8N9G6 341 aaPredicted RBP10.36□□□□□ -0.75
SKA2-204ENST00000578519 OR8J1Q8NGP2 316 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 TEX47Q8TBZ9 253 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 SLC7A13Q8TCU3 470 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 HOXB13Q92826 284 aaPredicted RBP10.36□□□□□ -0.75
SKA2-204ENST00000578519 OSTF1Q92882 214 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 SLC41A3Q96GZ6 507 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 MPP4Q96JB8 637 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 SLC41A2Q96JW4 573 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 SLC38A2Q96QD8 506 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 COPS4Q9BT78 406 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 SPRTNQ9H040 489 aaPredicted RBP10.36□□□□□ -0.75
SKA2-204ENST00000578519 RACGAP1Q9H0H5 632 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 FOLH1BQ9HBA9 442 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 ZNF304Q9HCX3 659 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 PRMT8Q9NR22 394 aaPredicted RBP10.36□□□□□ -0.75
SKA2-204ENST00000578519 RLIMQ9NVW2 624 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 KLHL3Q9UH77 587 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 RPL36Q9Y3U8 105 aaKnown RBP10.36□□□□□ -0.75
SKA2-204ENST00000578519 NUP214P35658 2090 aaPredicted RBP10.36□□□□□ -0.75
SKA2-204ENST00000578519 PLXND1Q9Y4D7 1925 aa10.36□□□□□ -0.75
SKA2-204ENST00000578519 MKI67P46013 3256 aaKnown RBP10.35□□□□□ -0.75
SKA2-204ENST00000578519 HTR3EA5X5Y0 456 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 B4GAT1O43505 415 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 FCMRO60667 390 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 DNAJB6O75190 326 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 CER1O95813 267 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 CBX7O95931 251 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 SYPP08247 313 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 FBLP22087 321 aaKnown RBP10.35□□□□□ -0.75
SKA2-204ENST00000578519 RPS4Y1P22090 263 aaKnown RBP10.35□□□□□ -0.75
SKA2-204ENST00000578519 PTGER1P34995 402 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 MAP3K8P41279 467 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 EEF1A1P68104 462 aaKnown RBP10.35□□□□□ -0.75
SKA2-204ENST00000578519 ROR2Q01974 943 aaKnown RBP10.35□□□□□ -0.75
SKA2-204ENST00000578519 CSTF1Q05048 431 aaKnown RBP10.35□□□□□ -0.75
SKA2-204ENST00000578519 FUT7Q11130 342 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 DSG2Q14126 1118 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 GPR107Q5VW38 600 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 NKAIN2Q5VXU1 208 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 RPL13AP3Q6NVV1 102 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 ZNF613Q6PF04 617 aa10.35□□□□□ -0.75
SKA2-204ENST00000578519 QSOX2Q6ZRP7 698 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms