RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 SLC26A5P58743 744 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 PSPHP78330 225 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 LIPEQ05469 1076 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 EEF1A2Q05639 463 aaKnown RBP7.42□□□□□ -1.22
COPS3-215ENST00000578317 DUSP8Q13202 625 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 CEACAM7Q14002 265 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 VEZF1Q14119 521 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 SELPLGQ14242 412 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 TRIM25Q14258 630 aaKnown RBP7.42□□□□□ -1.22
COPS3-215ENST00000578317 LASP1Q14847 261 aaKnown RBP7.42□□□□□ -1.22
COPS3-215ENST00000578317 PCOLCEQ15113 449 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 TGIF1Q15583 401 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 EXT1Q16394 746 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 PLAG1Q6DJT9 500 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 ERICH5Q6P6B1 374 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 PAPD4Q6PIY7 484 aaKnown RBP7.42□□□□□ -1.22
COPS3-215ENST00000578317 ZNF771Q7L3S4 317 aaPredicted RBP7.42□□□□□ -1.22
COPS3-215ENST00000578317 PPP1R32Q7Z5V6 425 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 RNF130Q86XS8 419 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 PTRH1Q86Y79 214 aaKnown RBP7.42□□□□□ -1.22
COPS3-215ENST00000578317 LGI4Q8N135 537 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 CLEC4FQ8N1N0 589 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 SIMC1Q8NDZ2 872 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 TNIP2Q8NFZ5 429 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 OR52R1Q8NGF1 315 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 OR10A6Q8NH74 314 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 OR5AK3PQ8NH89 298 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 C16orf52Q8NHV5 167 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 M1APQ8TC57 530 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 MCUR1Q96AQ8 359 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 C16orf58Q96GQ5 468 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 REXO5Q96IC2 774 aaKnown RBP7.42□□□□□ -1.22
COPS3-215ENST00000578317 LMF2Q9BU23 707 aaKnown RBP7.42□□□□□ -1.22
COPS3-215ENST00000578317 CNPPD1Q9BV87 410 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 DPH1Q9BZG8 443 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 PIGUQ9H490 435 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 GPN2Q9H9Y4 310 aaPredicted RBP7.42□□□□□ -1.22
COPS3-215ENST00000578317 COPS7AQ9UBW8 275 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 IL17BQ9UHF5 180 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 LIPT1Q9Y234 373 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 HEMK1Q9Y5R4 338 aaPredicted RBP7.42□□□□□ -1.22
COPS3-215ENST00000578317 KIF26BQ2KJY2 2108 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 ZFHX4Q86UP3 3567 aa7.42□□□□□ -1.22
COPS3-215ENST00000578317 IGHV3-20A0A0C4DH32 117 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 ELOVL7A1L3X0 281 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 A8MUA0 341 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 ALG1L2C9J202 215 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 HMGN4O00479 90 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 ZFAND5O76080 213 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 HPP00738 406 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 TFPTP0C1Z6 253 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 CT45A8P0DMV1 189 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 CT45A9P0DMV2 189 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 ETFAP13804 333 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 SSTR4P31391 388 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 PTGER1P34995 402 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 CRATP43155 626 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 GSK3BP49841 420 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 RPS18P62269 152 aaKnown RBP7.41□□□□□ -1.22
COPS3-215ENST00000578317 AP2B1P63010 937 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 PSG6Q00889 435 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 TRAP1Q12931 704 aaKnown RBP7.41□□□□□ -1.22
COPS3-215ENST00000578317 BNIP2Q12982 314 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 EXOSC7Q15024 291 aaKnown RBP7.41□□□□□ -1.22
COPS3-215ENST00000578317 ZNF630Q2M218 657 aaPredicted RBP7.41□□□□□ -1.22
COPS3-215ENST00000578317 VMACQ2NL98 169 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 CT45A2Q5DJT8 189 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.41□□□□□ -1.22
COPS3-215ENST00000578317 FAM69BQ5VUD6 431 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 PRAMEF8Q5VWM4 474 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 PRAMEF7Q5VXH5 474 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 FAAH2Q6GMR7 532 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 HEPHL1Q6MZM0 1159 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 RNF111Q6ZNA4 994 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 CDH24Q86UP0 819 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 CD163Q86VB7 1156 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 PTOV1Q86YD1 416 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 RAB43Q86YS6 212 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 SLC30A8Q8IWU4 369 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 ULK2Q8IYT8 1036 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 ARMC10Q8N2F6 343 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 C10orf111Q8N326 155 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 KIF2BQ8N4N8 673 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 HORMAD2Q8N7B1 307 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 SLC16A11Q8NCK7 471 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 ZNF248Q8NDW4 579 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 CHDHQ8NE62 594 aaPredicted RBP7.41□□□□□ -1.22
COPS3-215ENST00000578317 OR2T12Q8NG77 320 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 OR52E4Q8NGH9 312 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 OR5L2Q8NGL0 311 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 NUBPLQ8TB37 319 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 ELP5Q8TE02 316 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 ADAMTS15Q8TE58 950 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 THAP4Q8WY91 577 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 PMM1Q92871 262 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 UTP4Q969X6 686 aaKnown RBP7.41□□□□□ -1.22
COPS3-215ENST00000578317 ADIPOR1Q96A54 375 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 TP53INP1Q96A56 240 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 C8orf44Q96CB5 159 aa7.41□□□□□ -1.22
COPS3-215ENST00000578317 SLC35A4Q96G79 324 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms