RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 HEATR5AQ86XA9 2040 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 HRNRQ86YZ3 2850 aaPredicted RBP13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 SMIM23A6NLE4 172 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 UPK1AO00322 258 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 ZIC3O60481 467 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 PLIN3O60664 434 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 SHBGP04278 402 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 ZNF708P17019 499 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 DIO3P55073 304 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 DSCR4P56555 118 aaPredicted RBP13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 CLDN18P56856 261 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 DNAJB13P59910 316 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 GAB1Q13480 694 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 DECR1Q16698 335 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 NOXRED1Q6NXP6 359 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 SH2D5Q6ZV89 423 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 P4HA3Q7Z4N8 544 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 CHDHQ8NE62 594 aaPredicted RBP13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 RNF138Q8WVD3 245 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 YIPF4Q9BSR8 244 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 G6PC3Q9BUM1 346 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 CXXC4Q9H2H0 198 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 PIGMQ9H3S5 423 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 DSN1Q9H410 356 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 Q9N2J8 555 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 SDHAF3Q9NRP4 125 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 GALNT8Q9NY28 637 aa13.53□□□□□ -0.24
RN7SL560P-201ENST00000577943 C17orf51A8MQB3 221 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 B4DXG7 233 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 COPEO14579 308 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 SEC22BO75396 215 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 UROSP10746 265 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 PEPDP12955 493 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 CD99P14209 185 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 CPA3P15088 417 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 CRHR1P34998 444 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 RFX3P48380 749 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 CLK3P49761 638 aaKnown RBP13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 PSMD4P55036 377 aaKnown RBP13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 STX5Q13190 355 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 RAET1LQ5VY80 246 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 IKBIPQ70UQ0 350 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 UBQLNLQ8IYU4 475 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 OR2L13Q8N349 312 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 OR2M3Q8NG83 312 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 ELP4Q96EB1 424 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 EGLN2Q96KS0 407 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 AMDHD1Q96NU7 426 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 C12orf65Q9H3J6 166 aaKnown RBP13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 TNFRSF12AQ9NP84 129 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 OXSMQ9NWU1 459 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 FLRT3Q9NZU0 649 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 MED11Q9P086 117 aa13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 MRTO4Q9UKD2 239 aaKnown RBP13.52□□□□□ -0.25
RN7SL560P-201ENST00000577943 SLC28A1O00337 649 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 HCRTR2O43614 444 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 FADS1O60427 444 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 GOSR1O95249 250 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 PSMG1O95456 288 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 HK1P19367 917 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 PPP2R2AP63151 447 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 EEF1A1P68104 462 aaKnown RBP13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 HSPB3Q12988 150 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 GANABQ14697 944 aaKnown RBP13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 BCL2A1Q16548 175 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 EEF1A1P5Q5VTE0 462 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 LIPMQ5VYY2 423 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 CLEC6AQ6EIG7 209 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 TGIF2LYQ8IUE0 185 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 MEIOBQ8N635 442 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 FADS6Q8N9I5 356 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 GFM2Q969S9 779 aaKnown RBP13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 METTL2AQ96IZ6 378 aaKnown RBP13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 PTGES2Q9H7Z7 377 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 PPCSQ9HAB8 311 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 C3orf14Q9HBI5 128 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 C1orf109Q9NX04 203 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 PACSIN3Q9UKS6 424 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 ABCG2Q9UNQ0 655 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 FIS1Q9Y3D6 152 aa13.51□□□□□ -0.25
RN7SL560P-201ENST00000577943 SH3D21A4FU49 640 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 PDPK1O15530 556 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 RGS14O43566 566 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 IL33O95760 270 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 TGM6O95932 706 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 KRT4P19013 534 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 GPC1P35052 558 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 CPOXP36551 454 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 B3GALT5-AS1P59052 145 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 KEAP1Q14145 624 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 KIAA0040Q15053 153 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 PAMR1Q6UXH9 720 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 ZNF551Q7Z340 670 aaPredicted RBP13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 CAMKMTQ7Z624 323 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 MARCH3Q86UD3 253 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 TDRPQ86YL5 185 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 C4orf33Q8N1A6 199 aa13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 EIF1ADQ8N9N8 165 aaKnown RBP13.5□□□□□ -0.25
RN7SL560P-201ENST00000577943 LRRN4CLQ8ND94 238 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms