RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 SPAG16Q8N0X2 631 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 OR52H1Q8NGJ2 320 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 OR2T4Q8NH00 348 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 ADAMTS14Q8WXS8 1223 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 NPAS1Q99742 590 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 LRRN3Q9H3W5 708 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 LDAHQ9H6V9 325 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 FTSJ1Q9UET6 329 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 PRSS21Q9Y6M0 314 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 QSOX1O00391 747 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 EFCAB14O75071 495 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 OR5F1O95221 314 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 PTNP21246 168 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 NFYAP23511 347 aaPredicted RBP9.02□□□□□ -0.97
CCDC40-212ENST00000574799 AHCYP23526 432 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 ATP5C1P36542 298 aaKnown RBP9.02□□□□□ -0.97
CCDC40-212ENST00000574799 PITPNAQ00169 270 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 ILKQ13418 452 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 CAMK2DQ13557 499 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 CHRNA6Q15825 494 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 SYT14P1Q58G82 188 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 RNF219Q5W0B1 726 aaPredicted RBP9.02□□□□□ -0.97
CCDC40-212ENST00000574799 ADNP2Q6IQ32 1131 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 C19orf48Q6RUI8 117 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 TMPRSS11BQ86T26 416 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 CFAP206Q8IYR0 622 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 OR10H4Q8NGA5 316 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 OR51G2Q8NGK0 314 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 C2CD4CQ8TF44 421 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 RFKQ969G6 155 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 PRDM9Q9NQV7 894 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 NLGN3Q9NZ94 848 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 POMT2Q9UKY4 750 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 LIPT1Q9Y234 373 aa9.02□□□□□ -0.97
CCDC40-212ENST00000574799 F8W036 122 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 FAAHO00519 579 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 ARPC1BO15143 372 aaKnown RBP9.01□□□□□ -0.97
CCDC40-212ENST00000574799 RASGRP1O95267 797 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 LPLP06858 475 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 CCR2P41597 374 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 GIPRP48546 466 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 CDH4P55283 916 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 TAP2Q03519 686 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 DOC2BQ14184 412 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 SPOUT1Q5T280 376 aaKnown RBP9.01□□□□□ -0.97
CCDC40-212ENST00000574799 SFRP5Q5T4F7 317 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 REEP3Q6NUK4 255 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 TMEM107Q6UX40 140 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 C11orf96Q7Z7L8 435 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 TSPAN33Q86UF1 283 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 FAM181AQ8N9Y4 354 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 OR52N2Q8NGI0 321 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 HUS1BQ8NHY5 278 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 CHTF18Q8WVB6 975 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 SPRYD4Q8WW59 207 aaPredicted RBP9.01□□□□□ -0.97
CCDC40-212ENST00000574799 CHFRQ96EP1 664 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 ZNF582Q96NG8 517 aaPredicted RBP9.01□□□□□ -0.97
CCDC40-212ENST00000574799 ACTR6Q9GZN1 396 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 BIN3Q9NQY0 253 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 FLVCR2Q9UPI3 526 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 TRDV1A0A1B0GX56 115 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 K7ERQ8 282 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 EPHX1P07099 455 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 PPP2R1BP30154 601 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 XCR1P46094 333 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 VEGFCP49767 419 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 STX4Q12846 297 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 MAP4K2Q12851 820 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 HTR4Q13639 388 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 DOC2AQ14183 400 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 SLC5A12Q1EHB4 618 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 C3orf38Q5JPI3 329 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 METTL3Q86U44 580 aaKnown RBP9.01□□□□□ -0.97
CCDC40-212ENST00000574799 OR4K5Q8NGD3 323 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 OR8J2Q8NGG1 315 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 OR56B4Q8NH76 319 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 CLP1Q92989 425 aaKnown RBP9.01□□□□□ -0.97
CCDC40-212ENST00000574799 KLHL15Q96M94 604 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 ZNF607Q96SK3 696 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 RPS6KB2Q9UBS0 482 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 IL20RAQ9UHF4 553 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 MRTO4Q9UKD2 239 aaKnown RBP9.01□□□□□ -0.97
CCDC40-212ENST00000574799 HEPACAM2A8MVW5 462 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 H7C4K7 107 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 PRODHO43272 600 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 TGFB1P01137 390 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 ADRB1P08588 477 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 PRG2P13727 222 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 GJA1P17302 382 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 ACADLP28330 430 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 MANFP55145 182 aaKnown RBP9.01□□□□□ -0.97
CCDC40-212ENST00000574799 PRMT2P55345 433 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 MC1RQ01726 317 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 RAB33AQ14088 237 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 ETFDHQ16134 617 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 SMARCD3Q6STE5 483 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 CEACAM19Q7Z692 300 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 DDX53Q86TM3 631 aaKnown RBP9.01□□□□□ -0.97
CCDC40-212ENST00000574799 PLPP6Q8IY26 295 aa9.01□□□□□ -0.97
CCDC40-212ENST00000574799 CCDC36Q8IYA8 594 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms