RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ZMAT5Q9UDW3 170 aaKnown RBP13.54□□□□□ -0.24
SMG6-215ENST00000574501 CSNK1G3Q9Y6M4 447 aa13.54□□□□□ -0.24
SMG6-215ENST00000574501 USP34Q70CQ2 3546 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 A0A1W2PRQ8 180 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 A8MXK9 166 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 L7N2F9 121 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 SLC28A2O43868 658 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 KCNJ13O60928 360 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 MTNR1BP49286 362 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 CRHR2Q13324 411 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 FZD5Q13467 585 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 ETFDHQ16134 617 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 CCL14Q16627 93 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 PLEKHS1Q5SXH7 462 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 SLC30A6Q6NXT4 461 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 C1orf94Q6P1W5 598 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 SMARCD3Q6STE5 483 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 FAM198BQ6UWH4 519 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 CXCL17Q6UXB2 119 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 BTN2A1Q7KYR7 527 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 SZRD1Q7Z422 152 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 CBARPQ8N350 705 aaPredicted RBP13.53□□□□□ -0.24
SMG6-215ENST00000574501 POGLUT1Q8NBL1 392 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 MORN4Q8NDC4 146 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 FERD3LQ96RJ6 166 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 ABCG4Q9H172 646 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 ASB6Q9NWX5 421 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 GMEB2Q9UKD1 530 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 CHST2Q9Y4C5 530 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 KDM4EB2RXH2 506 aaPredicted RBP13.53□□□□□ -0.24
SMG6-215ENST00000574501 PDCD5O14737 125 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 APOC3P02656 99 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 PEPDP12955 493 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 TBXA2RP21731 343 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 ATP5A1P25705 553 aaKnown RBP13.53□□□□□ -0.24
SMG6-215ENST00000574501 IMPA1P29218 277 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 HSPB3Q12988 150 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 SNTB2Q13425 540 aaKnown RBP13.53□□□□□ -0.24
SMG6-215ENST00000574501 HSD17B12Q53GQ0 312 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 KIAA1211LQ6NV74 962 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 ZNF322Q6U7Q0 402 aaPredicted RBP13.53□□□□□ -0.24
SMG6-215ENST00000574501 CD300LDQ6UXZ3 194 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 DGLUCYQ7Z3D6 616 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 ANKRD53Q8N9V6 530 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 OR6T1Q8NGN1 323 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 THAP4Q8WY91 577 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 FCRL4Q96PJ5 515 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.53□□□□□ -0.24
SMG6-215ENST00000574501 C20orf85Q9H1P6 137 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 DDX31Q9H8H2 851 aaKnown RBP13.53□□□□□ -0.24
SMG6-215ENST00000574501 KCNK12Q9HB15 430 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 A4GALTQ9NPC4 353 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 CD93Q9NPY3 652 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 PFDN2Q9UHV9 154 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 NPTNQ9Y639 398 aa13.53□□□□□ -0.24
SMG6-215ENST00000574501 TUBAL3A6NHL2 446 aa13.52□□□□□ -0.24
SMG6-215ENST00000574501 CHURC1-FNTBB4DL54 471 aa13.52□□□□□ -0.24
SMG6-215ENST00000574501 HMGN4O00479 90 aa13.52□□□□□ -0.24
SMG6-215ENST00000574501 B4GALT2O60909 372 aa13.52□□□□□ -0.24
SMG6-215ENST00000574501 UBXN7O94888 489 aa13.52□□□□□ -0.24
SMG6-215ENST00000574501 SLC2A10O95528 541 aa13.52□□□□□ -0.24
SMG6-215ENST00000574501 GAAP10253 952 aa13.52□□□□□ -0.24
SMG6-215ENST00000574501 SLBPQ14493 270 aaKnown RBP eCLIP13.52□□□□□ -0.24
SMG6-215ENST00000574501 ZNF169Q14929 603 aaPredicted RBP13.52□□□□□ -0.24
SMG6-215ENST00000574501 ENTPD8Q5MY95 495 aa13.52□□□□□ -0.24
SMG6-215ENST00000574501 PRICKLE2Q7Z3G6 844 aa13.52□□□□□ -0.24
SMG6-215ENST00000574501 RASGRP3Q8IV61 690 aa13.52□□□□□ -0.24
SMG6-215ENST00000574501 IZUMO1Q8IYV9 350 aa13.52□□□□□ -0.24
SMG6-215ENST00000574501 DMRTA2Q96SC8 542 aa13.52□□□□□ -0.24
SMG6-215ENST00000574501 NPAS1Q99742 590 aa13.52□□□□□ -0.24
SMG6-215ENST00000574501 DPYSL5Q9BPU6 564 aa13.52□□□□□ -0.24
SMG6-215ENST00000574501 TREX2Q9BQ50 279 aaPredicted RBP13.52□□□□□ -0.24
SMG6-215ENST00000574501 SCPEP1Q9HB40 452 aa13.52□□□□□ -0.24
SMG6-215ENST00000574501 TDP1Q9NUW8 608 aa13.52□□□□□ -0.24
SMG6-215ENST00000574501 RPS6KB2Q9UBS0 482 aa13.52□□□□□ -0.24
SMG6-215ENST00000574501 LIPT1Q9Y234 373 aa13.52□□□□□ -0.24
SMG6-215ENST00000574501 PLXNB3Q9ULL4 1909 aa13.52□□□□□ -0.24
SMG6-215ENST00000574501 UGT2B7P16662 529 aa13.52□□□□□ -0.25
SMG6-215ENST00000574501 MAPK9P45984 424 aa13.52□□□□□ -0.25
SMG6-215ENST00000574501 MANFP55145 182 aaKnown RBP13.52□□□□□ -0.25
SMG6-215ENST00000574501 NDUFA9Q16795 377 aa13.52□□□□□ -0.25
SMG6-215ENST00000574501 SLCO4C1Q6ZQN7 724 aa13.52□□□□□ -0.25
SMG6-215ENST00000574501 C6orf120Q7Z4R8 191 aa13.52□□□□□ -0.25
SMG6-215ENST00000574501 SIRT6Q8N6T7 355 aa13.52□□□□□ -0.25
SMG6-215ENST00000574501 OR51G2Q8NGK0 314 aa13.52□□□□□ -0.25
SMG6-215ENST00000574501 OR5D16Q8NGK9 328 aa13.52□□□□□ -0.25
SMG6-215ENST00000574501 OR51Q1Q8NH59 317 aa13.52□□□□□ -0.25
SMG6-215ENST00000574501 OR56B4Q8NH76 319 aa13.52□□□□□ -0.25
SMG6-215ENST00000574501 ZFPM2Q8WW38 1151 aa13.52□□□□□ -0.25
SMG6-215ENST00000574501 CNOT9Q92600 299 aaKnown RBP13.52□□□□□ -0.25
SMG6-215ENST00000574501 ZNF607Q96SK3 696 aa13.52□□□□□ -0.25
SMG6-215ENST00000574501 USB1Q9BQ65 265 aaKnown RBP13.52□□□□□ -0.25
SMG6-215ENST00000574501 GSDMCQ9BYG8 508 aa13.52□□□□□ -0.25
SMG6-215ENST00000574501 GPR62Q9BZJ7 368 aa13.52□□□□□ -0.25
SMG6-215ENST00000574501 BTBD1Q9H0C5 482 aa13.52□□□□□ -0.25
SMG6-215ENST00000574501 OR10A4Q9H209 315 aa13.52□□□□□ -0.25
SMG6-215ENST00000574501 CA10Q9NS85 328 aa13.52□□□□□ -0.25
SMG6-215ENST00000574501 HPF1Q9NWY4 346 aa13.52□□□□□ -0.25
SMG6-215ENST00000574501 COPZ2Q9P299 210 aa13.52□□□□□ -0.25
SMG6-215ENST00000574501 GLS2Q9UI32 602 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms