RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 CASP3P42574 277 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 CLK3P49761 638 aaKnown RBP10.12□□□□□ -0.79
CHD3-216ENST00000573936 ANXA11P50995 505 aaKnown RBP10.12□□□□□ -0.79
CHD3-216ENST00000573936 KCNJ2P63252 427 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 TXNL4AP83876 142 aaKnown RBP10.12□□□□□ -0.79
CHD3-216ENST00000573936 CBX1P83916 185 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 PMP22Q01453 160 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 SF3A3Q12874 501 aaKnown RBP eCLIP10.12□□□□□ -0.79
CHD3-216ENST00000573936 EIF2S3LQ2VIR3 472 aaKnown RBP10.12□□□□□ -0.79
CHD3-216ENST00000573936 PACS2Q86VP3 889 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 SLC22A16Q86VW1 577 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 ANKRD46Q86W74 232 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 CPSF7Q8N684 471 aaKnown RBP10.12□□□□□ -0.79
CHD3-216ENST00000573936 COX18Q8N8Q8 333 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 ST6GALNAC3Q8NDV1 305 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 OR4N2Q8NGD1 307 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 JADE3Q92613 823 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 DTNBP1Q96EV8 351 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 ITCHQ96J02 903 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 SLC35G5Q96KT7 338 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 ADOQ96SZ5 270 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 ELAC2Q9BQ52 826 aaKnown RBP10.12□□□□□ -0.79
CHD3-216ENST00000573936 DOHHQ9BU89 302 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 G6PC3Q9BUM1 346 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 TMEM120AQ9BXJ8 343 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 ANGPTL4Q9BY76 406 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 PIGUQ9H490 435 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 METTL7AQ9H8H3 244 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 HHATLQ9HCP6 504 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 DEPPQ9NTK1 212 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 KLHL14Q9P2G3 628 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.12□□□□□ -0.79
CHD3-216ENST00000573936 ABCA12Q86UK0 2595 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 CSMD1Q96PZ7 3565 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 CCDC154A6NI56 674 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 TFECO14948 347 aaPredicted RBP10.11□□□□□ -0.79
CHD3-216ENST00000573936 ANP32DO95626 131 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 KRT75O95678 551 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 FAM107AO95990 144 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 AK1P00568 194 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 ACP2P11117 423 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 CHI3L1P36222 383 aaPredicted RBP10.11□□□□□ -0.79
CHD3-216ENST00000573936 TRPC1P48995 793 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 DNASE1L1P49184 302 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 PPIAP62937 165 aaKnown RBP10.11□□□□□ -0.79
CHD3-216ENST00000573936 POU6F2P78424 691 aaPredicted RBP10.11□□□□□ -0.79
CHD3-216ENST00000573936 RBPJQ06330 500 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 MRPL49Q13405 166 aaKnown RBP10.11□□□□□ -0.79
CHD3-216ENST00000573936 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.11□□□□□ -0.79
CHD3-216ENST00000573936 HYAL4Q2M3T9 481 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 AGKQ53H12 422 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 EXOSC6Q5RKV6 272 aaKnown RBP10.11□□□□□ -0.79
CHD3-216ENST00000573936 PRAMEF20Q5VT98 475 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 ZNF787Q6DD87 383 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 ZNF621Q6ZSS3 439 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 MAMDC2Q7Z304 686 aaPredicted RBP10.11□□□□□ -0.79
CHD3-216ENST00000573936 SPATA21Q7Z572 469 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 WDR53Q7Z5U6 358 aaPredicted RBP10.11□□□□□ -0.79
CHD3-216ENST00000573936 SLC16A11Q8NCK7 471 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 OR9I1Q8NGQ6 314 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 OR5AK3PQ8NH89 298 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 FAM110BQ8TC76 370 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 MIPOL1Q8TD10 442 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 C10orf82Q8WW14 230 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 NEURL3Q96EH8 262 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 RMND5BQ96G75 393 aaPredicted RBP10.11□□□□□ -0.79
CHD3-216ENST00000573936 C16orf58Q96GQ5 468 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 TMEM41AQ96HV5 264 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 ZNF597Q96LX8 424 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 GPR137Q96N19 417 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 NODALQ96S42 347 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 CCT8L2Q96SF2 557 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 SLX1AQ9BQ83 275 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 SLC35A5Q9BS91 424 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 YIPF4Q9BSR8 244 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 BTBD2Q9BX70 525 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 OSBPL11Q9BXB4 747 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 TTTY12Q9BZ98 90 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 ZFP64Q9NPA5 681 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 SDHAF3Q9NRP4 125 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 EXD2Q9NVH0 621 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 GPATCH2Q9NW75 528 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 QPCTLQ9NXS2 382 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 TUBA8Q9NY65 449 aaPredicted RBP10.11□□□□□ -0.79
CHD3-216ENST00000573936 KLRF1Q9NZS2 232 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 CCDC167Q9P0B6 97 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 B4GALT7Q9UBV7 327 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 SEC14L3Q9UDX4 400 aa10.11□□□□□ -0.79
CHD3-216ENST00000573936 GXYLT2A0PJZ3 443 aa10.1□□□□□ -0.79
CHD3-216ENST00000573936 ANKUB1A6NFN9 424 aa10.1□□□□□ -0.79
CHD3-216ENST00000573936 PRAMEF25A6NGN4 478 aa10.1□□□□□ -0.79
CHD3-216ENST00000573936 C9JVG2 144 aa10.1□□□□□ -0.79
CHD3-216ENST00000573936 NPIPA5E9PKD4 350 aa10.1□□□□□ -0.79
CHD3-216ENST00000573936 G3V3Y1 287 aa10.1□□□□□ -0.79
CHD3-216ENST00000573936 ASNA1O43681 348 aa10.1□□□□□ -0.79
CHD3-216ENST00000573936 SNX3O60493 162 aa10.1□□□□□ -0.79
CHD3-216ENST00000573936 ICOSLGO75144 302 aa10.1□□□□□ -0.79
CHD3-216ENST00000573936 TRIM3O75382 744 aaPredicted RBP10.1□□□□□ -0.79
CHD3-216ENST00000573936 GLSO94925 669 aaPredicted RBP10.1□□□□□ -0.79
CHD3-216ENST00000573936 KCNK2O95069 426 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms