RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	TRBV5-3	A0A0A0MS03	114 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	NPIPA5	E9PKD4	350 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	FXYD1	O00168	92 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	CLIC1	O00299	241 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	GSC2	O15499	205 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	ZNF354A	O60765	605 aa	Predicted RBP	13.23	□□□□□ -0.29
ABR-223	ENST00000573895	SLC19A2	O60779	497 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	NADK	O95544	446 aa	Predicted RBP	13.23	□□□□□ -0.29
ABR-223	ENST00000573895	CLPS	P04118	112 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	GSN	P06396	782 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	HOXB9	P17482	250 aa	Predicted RBP	13.23	□□□□□ -0.29
ABR-223	ENST00000573895	CNR1	P21554	472 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	SLC6A2	P23975	617 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	CDKN2C	P42773	168 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	CA7	P43166	264 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	CCT3	P49368	545 aa	Known RBP	13.23	□□□□□ -0.29
ABR-223	ENST00000573895	CASP6	P55212	293 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	ZNF750	Q32MQ0	723 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	ZNF791	Q3KP31	576 aa	Predicted RBP	13.23	□□□□□ -0.29
ABR-223	ENST00000573895	C6orf163	Q5TEZ5	329 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	SPPL2C	Q8IUH8	684 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	ZNF615	Q8N8J6	731 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	ZNF441	Q8N8Z8	693 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	SFXN5	Q8TD22	340 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	SPACA9	Q96E40	222 aa	Predicted RBP	13.23	□□□□□ -0.29
ABR-223	ENST00000573895	ELP4	Q96EB1	424 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	SH2D2A	Q9NP31	389 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	SACM1L	Q9NTJ5	587 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	VAPA	Q9P0L0	249 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	NTM	Q9P121	344 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	NPIPA1	Q9UND3	350 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	CFL2	Q9Y281	166 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	L3MBTL1	Q9Y468	752 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	NCOA6	Q14686	2063 aa	Predicted RBP	13.23	□□□□□ -0.29
ABR-223	ENST00000573895	ITPR2	Q14571	2701 aa		13.23	□□□□□ -0.29
ABR-223	ENST00000573895	C2orf92	A0A1B0GVN3	265 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895		A0A1W2PS29	197 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	TFEC	O14948	347 aa	Predicted RBP	13.22	□□□□□ -0.29
ABR-223	ENST00000573895	EMC8	O43402	210 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	PLOD3	O60568	738 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	DNAJA2	O60884	412 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	BCAS2	O75934	225 aa	Predicted RBP	13.22	□□□□□ -0.29
ABR-223	ENST00000573895	WISP2	O76076	250 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	SOX30	O94993	753 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	ABCB1	P08183	1280 aa	Predicted RBP	13.22	□□□□□ -0.29
ABR-223	ENST00000573895	FBXO45	P0C2W1	286 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	EFNA1	P20827	205 aa	Predicted RBP	13.22	□□□□□ -0.29
ABR-223	ENST00000573895	S1PR1	P21453	382 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	NT5E	P21589	574 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	PGM1	P36871	562 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	TXNL4A	P83876	142 aa	Known RBP	13.22	□□□□□ -0.29
ABR-223	ENST00000573895	PRR5	P85299	388 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	HSPB3	Q12988	150 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	HYAL4	Q2M3T9	481 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	PRICKLE4	Q2TBC4	344 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	SPDYE7P	Q495Y7	208 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	SAMD4B	Q5PRF9	694 aa	Known RBP	13.22	□□□□□ -0.29
ABR-223	ENST00000573895	C1QL3	Q5VWW1	255 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	SLC22A10	Q63ZE4	541 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	FAM180B	Q6P0A1	224 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	LYPD8	Q6UX82	237 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	MAMDC2	Q7Z304	686 aa	Predicted RBP	13.22	□□□□□ -0.29
ABR-223	ENST00000573895	FJX1	Q86VR8	437 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	SLC15A3	Q8IY34	581 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	TAGAP	Q8N103	731 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	OR2M7	Q8NG81	312 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	OR56A1	Q8NGH5	318 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	PAQR8	Q8TEZ7	354 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	ZFP90	Q8TF47	636 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	MCUR1	Q96AQ8	359 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	CTHRC1	Q96CG8	243 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	MAGED4	Q96JG8	741 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	CDRT15	Q96T59	188 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	FAM173A	Q9BQD7	235 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	SLC35A5	Q9BS91	424 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	THUMPD3	Q9BV44	507 aa	Known RBP	13.22	□□□□□ -0.29
ABR-223	ENST00000573895	OR10A5	Q9H207	317 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	CXorf36	Q9H7Y0	433 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	TPT1P8	Q9HAU6	139 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	PLSCR2	Q9NRY7	297 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	SIRT3	Q9NTG7	399 aa	Predicted RBP	13.22	□□□□□ -0.29
ABR-223	ENST00000573895	DEPP	Q9NTK1	212 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	SLC25A37	Q9NYZ2	338 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	CNIH4	Q9P003	139 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	TMEM181	Q9P2C4	612 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	SUCO	Q9UBS9	1254 aa	Known RBP	13.22	□□□□□ -0.29
ABR-223	ENST00000573895	ZNF639	Q9UID6	485 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	SNX8	Q9Y5X2	465 aa		13.22	□□□□□ -0.29
ABR-223	ENST00000573895	TRGV8	A0A0C4DH27	118 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	CFAP73	A6NFT4	308 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	ACOT7	O00154	380 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895		P04436	131 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	CT62	P0C5K7	136 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	GPX2	P18283	190 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	SSTR4	P31391	388 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	CHI3L1	P36222	383 aa	Predicted RBP	13.21	□□□□□ -0.29
ABR-223	ENST00000573895	CDK9	P50750	372 aa	Known RBP	13.21	□□□□□ -0.29
ABR-223	ENST00000573895	ANXA11	P50995	505 aa	Known RBP	13.21	□□□□□ -0.29
ABR-223	ENST00000573895	EEFSEC	P57772	596 aa	Known RBP	13.21	□□□□□ -0.29
ABR-223	ENST00000573895	GPR85	P60893	370 aa		13.21	□□□□□ -0.29

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