RNA–Protein interactions for RNA: ENST00000572905.1

TOM1L1-215, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 3

Gene TOM1L1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-215	ENST00000572905	C17orf47	Q8NEP4	570 aa		4.08	□□□□□ -1.76
TOM1L1-215	ENST00000572905	FNDC8	Q8TC99	324 aa		4.08	□□□□□ -1.76
TOM1L1-215	ENST00000572905	C11orf24	Q96F05	449 aa	Predicted RBP	4.08	□□□□□ -1.76
TOM1L1-215	ENST00000572905	AKR1E2	Q96JD6	320 aa		4.08	□□□□□ -1.76
TOM1L1-215	ENST00000572905	C4orf36	Q96KX1	117 aa		4.08	□□□□□ -1.76
TOM1L1-215	ENST00000572905	FEM1A	Q9BSK4	669 aa		4.08	□□□□□ -1.76
TOM1L1-215	ENST00000572905	RAB33B	Q9H082	229 aa		4.08	□□□□□ -1.76
TOM1L1-215	ENST00000572905	PALMD	Q9NP74	551 aa		4.08	□□□□□ -1.76
TOM1L1-215	ENST00000572905	SENP1	Q9P0U3	644 aa		4.08	□□□□□ -1.76
TOM1L1-215	ENST00000572905	MRPS7	Q9Y2R9	242 aa	Known RBP	4.08	□□□□□ -1.76
TOM1L1-215	ENST00000572905	PPIAL4C	A0A0B4J2A2	164 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	GSAP	A4D1B5	854 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	ZNF487	B1APH4	448 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905		H0YCG3	227 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	CASK	O14936	926 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	PPIH	O43447	177 aa	Known RBP	4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	GMFG	O60234	142 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	RAMP1	O60894	148 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	IGHV3-13	P01766	116 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	IGHV3-9	P01782	118 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	IGFBP1	P08833	259 aa	Predicted RBP	4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	WNT2	P09544	360 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	PPIAL4G	P0DN37	164 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	PRG2	P13727	222 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	PVR	P15151	417 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	DRD5	P21918	477 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	TATDN3	Q17R31	274 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	LINC01620	Q4KN68	170 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	SLX4IP	Q5VYV7	408 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	ZNF343	Q6P1L6	599 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	SCYL2	Q6P3W7	929 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	GPRIN3	Q6ZVF9	776 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	LRRC70	Q7Z2Q7	622 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	GRAMD2A	Q8IUY3	354 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	ZDHHC21	Q8IVQ6	265 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	RFESD	Q8TAC1	157 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	TBCK	Q8TEA7	893 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	RASL10A	Q92737	203 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	DNAJA3	Q96EY1	480 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	C9orf85	Q96MD7	179 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	SLC30A2	Q9BRI3	323 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	RPP25	Q9BUL9	199 aa	Known RBP	4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	COMMD4	Q9H0A8	199 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	SLC25A51	Q9H1U9	297 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	DHX33	Q9H6R0	707 aa	Known RBP	4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	RMND5A	Q9H871	391 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	GPN2	Q9H9Y4	310 aa	Predicted RBP	4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	BARX2	Q9UMQ3	279 aa	Predicted RBP	4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905	NTNG1	Q9Y2I2	539 aa		4.07	□□□□□ -1.76
TOM1L1-215	ENST00000572905		A0A1W2PPR1	153 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	ACOD1	A6NK06	481 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	SHISA9	B4DS77	424 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	LRRTM2	O43300	516 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	SH3BGRL	O75368	114 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	TBX6	O95947	436 aa	Predicted RBP	4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	MBD3	O95983	291 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	REN	P00797	406 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	MELTF	P08582	738 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	HOXD4	P09016	255 aa	Predicted RBP	4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	BCKDHA	P12694	445 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	IGFBP5	P24593	272 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	OTX2	P32243	289 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	VEGFC	P49767	419 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	RPS6	P62753	249 aa	Known RBP	4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	CYLC2	Q14093	348 aa	Predicted RBP	4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	ABRAXAS2	Q15018	415 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	PDK4	Q16654	411 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	MICA	Q29983	383 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	NHLRC3	Q5JS37	347 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	ATAD3B	Q5T9A4	648 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	TIPARP	Q7Z3E1	657 aa	Known RBP	4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	ANKRD37	Q7Z713	158 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	SLC25A42	Q86VD7	318 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	TBC1D21	Q8IYX1	336 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	OR2T34	Q8NGX1	318 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	DHTKD1	Q96HY7	919 aa	Predicted RBP	4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	CASD1	Q96PB1	797 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	ERP44	Q9BS26	406 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	TRIM6	Q9C030	488 aa	Predicted RBP	4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	POLR1E	Q9GZS1	481 aa	Known RBP	4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	CALHM2	Q9HA72	323 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	RCOR3	Q9P2K3	495 aa	Predicted RBP	4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	KLK13	Q9UKR3	277 aa		4.06	□□□□□ -1.76
TOM1L1-215	ENST00000572905	PPIAL4D	F5H284	164 aa		4.05	□□□□□ -1.76
TOM1L1-215	ENST00000572905	XPO1	O14980	1071 aa	Known RBP	4.05	□□□□□ -1.76
TOM1L1-215	ENST00000572905	CTAGE5	O15320	804 aa		4.05	□□□□□ -1.76
TOM1L1-215	ENST00000572905	DUX1	O43812	170 aa		4.05	□□□□□ -1.76
TOM1L1-215	ENST00000572905	STX11	O75558	287 aa		4.05	□□□□□ -1.76
TOM1L1-215	ENST00000572905	RHOBTB1	O94844	696 aa		4.05	□□□□□ -1.76
TOM1L1-215	ENST00000572905	UFL1	O94874	794 aa		4.05	□□□□□ -1.76
TOM1L1-215	ENST00000572905	JCHAIN	P01591	159 aa		4.05	□□□□□ -1.76
TOM1L1-215	ENST00000572905	SDC1	P18827	310 aa		4.05	□□□□□ -1.76
TOM1L1-215	ENST00000572905	ATP6V1C1	P21283	382 aa		4.05	□□□□□ -1.76
TOM1L1-215	ENST00000572905	KRTAP5-9	P26371	169 aa		4.05	□□□□□ -1.76
TOM1L1-215	ENST00000572905	RPL34	P49207	117 aa	Known RBP	4.05	□□□□□ -1.76
TOM1L1-215	ENST00000572905	POU3F4	P49335	361 aa		4.05	□□□□□ -1.76
TOM1L1-215	ENST00000572905	CRMP1	Q14194	572 aa		4.05	□□□□□ -1.76
TOM1L1-215	ENST00000572905	DCST2	Q5T1A1	773 aa		4.05	□□□□□ -1.76
TOM1L1-215	ENST00000572905	LGSN	Q5TDP6	509 aa		4.05	□□□□□ -1.76
TOM1L1-215	ENST00000572905	LEMD1	Q68G75	181 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms