RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 THADAQ6YHU6 1953 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 ZCWPW2A0A1B0GU75 182 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 CCDC195A0A1B0GUA6 201 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 A0A1B0GVM2 712 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 LNP1A1A4G5 178 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 CLEC18AA5D8T8 446 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 DPPA5A6NC42 116 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 ANTXRLA6NF34 631 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 PRAMEF25A6NGN4 478 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 OR51F1A6NGY5 319 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 PRR19A6NJB7 356 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 KIAA1324LA8MWY0 1029 aaPredicted RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 A8MX80 341 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 NPIPB8E9PQR5 432 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 PRAMEF26H0Y7S4 382 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 F2RL2O00254 374 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 RFXAPO00287 272 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 ARPC3O15145 178 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 STX7O15400 261 aaKnown RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 TOX3O15405 576 aaPredicted RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 TYROBPO43914 113 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 TSPAN2O60636 221 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 PRAMEF4O60810 478 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 PRAMEF11O60813 436 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 RAMP2O60895 175 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 CNOT3O75175 753 aaKnown RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 RAD51DO75771 328 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 FTH1P02794 183 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 MT-ND1P03886 318 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 SERPIND1P05546 499 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 CA3P07451 260 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 RHOCP08134 193 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 CELA3BP08861 270 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 CHRM5P08912 532 aaPredicted RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 PIRTP0C851 137 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 PRSS56P0CW18 603 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 GFAPP14136 432 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 MMP9P14780 707 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 CPA3P15088 417 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 ACADSP16219 412 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 PGAM1P18669 254 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 MSH3P20585 1137 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 PAICSP22234 425 aaKnown RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 DTYMKP23919 212 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 ITGB7P26010 798 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 GSTM2P28161 218 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 PRDX6P30041 224 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 OR1E1P30953 314 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 STX2P32856 288 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 BMP8BP34820 402 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 GJA4P35212 333 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 PHBP35232 272 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 RPA3P35244 121 aaPredicted RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 EIF2S3P41091 472 aaKnown RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 CSKP41240 450 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 MAGEB1P43366 347 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 CAPZBP47756 277 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 PPP3CCP48454 512 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 ZNF135P52742 658 aaPredicted RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 AP1S2P56377 157 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 RPL26P61254 145 aaKnown RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 IRX4P78413 519 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 ECT2LQ008S8 904 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 NHLH1Q02575 133 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 GNA12Q03113 381 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 FGL1Q08830 312 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 NFATC3Q12968 1075 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 STX3Q13277 289 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 MADCAM1Q13477 382 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 PEX6Q13608 980 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 RUNX2Q13950 521 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 POU6F1Q14863 301 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 SLC17A1Q14916 467 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 KPNB1Q14974 876 aaKnown RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 CYTH1Q15438 398 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 SHHQ15465 462 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 VAMP3Q15836 100 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 TATDN3Q17R31 274 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 ALKBH6Q3KRA9 238 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 AKIRIN2Q53H80 203 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 XKR6Q5GH73 641 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 PPM1JQ5JR12 505 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 CTSL3PQ5NE16 218 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 C6orf183Q5T699 404 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 PHF19Q5T6S3 580 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 KHDRBS2Q5VWX1 349 aaKnown RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 METTL21CQ5VZV1 264 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 TTC23Q5W5X9 447 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 ANKRD26P1Q6NSI1 321 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 MRPL14Q6P1L8 145 aaKnown RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 TMEM220Q6QAJ8 160 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 CLEC18BQ6UXF7 455 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 C4orf22Q6V702 233 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 Q6ZPB1 254 aaPredicted RBP3.33□□□□□ -1.88
SMG6-208ENST00000570874 LRRC74BQ6ZQY2 392 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 ZBTB49Q6ZSB9 765 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 TMEM26Q6ZUK4 368 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 SH2D5Q6ZV89 423 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 ASRGL1Q7L266 308 aa3.33□□□□□ -1.88
SMG6-208ENST00000570874 BMP8AQ7Z5Y6 402 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms