RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 A0A1W2PP55 124 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 MSL3P1P0C860 447 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 ACP2P11117 423 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 GSTM3P21266 225 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 PYCR1P32322 319 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 PPP3R1P63098 170 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 DSG2Q14126 1118 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 FLYWCH1Q4VC44 716 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 RPTNQ6XPR3 784 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 GET4Q7L5D6 327 aaPredicted RBP14.38□□□□□ -0.11
USP43-202ENST00000570475 CDK20Q8IZL9 346 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 HDDC3Q8N4P3 179 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 TMEM163Q8TC26 289 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 NXF2Q9GZY0 626 aaKnown RBP14.38□□□□□ -0.11
USP43-202ENST00000570475 ISG20L2Q9H9L3 353 aaKnown RBP14.38□□□□□ -0.11
USP43-202ENST00000570475 SLC25A19Q9HC21 320 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 WSB2Q9NYS7 404 aaPredicted RBP14.38□□□□□ -0.11
USP43-202ENST00000570475 TBC1D3DA0A087WVF3 549 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 TBC1D3IA0A087WXS9 549 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 TBC1D3EA0A087X179 549 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 TBC1D3KA0A087X1G2 549 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 PRAMEF27A3QJZ7 478 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 TBC1D3FA6NER0 549 aaPredicted RBP14.38□□□□□ -0.11
USP43-202ENST00000570475 ZSCAN5BA6NJL1 495 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 TBC1D3LB9A6J9 549 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 UBXN7O94888 489 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 SYPP08247 313 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 TBC1D3HP0C7X1 549 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 CHRNB1P11230 501 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 PEPDP12955 493 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 ZNF234Q14588 700 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 ENTPD8Q5MY95 495 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 TBC1D3GQ6DHY5 549 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 TBC1D3CQ6IPX1 549 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 ZNF770Q6IQ21 691 aaPredicted RBP14.38□□□□□ -0.11
USP43-202ENST00000570475 SLC39A5Q6ZMH5 540 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 GPR155Q7Z3F1 870 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 CEACAM19Q7Z692 300 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.38□□□□□ -0.11
USP43-202ENST00000570475 ELMOD2Q8IZ81 293 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 TBC1D3Q8IZP1 549 aaPredicted RBP14.38□□□□□ -0.11
USP43-202ENST00000570475 OR8D4Q8NGM9 314 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 MRGPRX3Q96LB0 322 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 RIPOR3Q96MK2 946 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 RBCK1Q9BYM8 510 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 C6orf106Q9H6K1 298 aaPredicted RBP14.38□□□□□ -0.11
USP43-202ENST00000570475 A4GALTQ9NPC4 353 aa14.38□□□□□ -0.11
USP43-202ENST00000570475 USP36Q9P275 1121 aaKnown RBP14.38□□□□□ -0.11
USP43-202ENST00000570475 MID1O15344 667 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 NOS1APO75052 506 aaPredicted RBP14.37□□□□□ -0.11
USP43-202ENST00000570475 RECKO95980 971 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 ACADMP11310 421 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 NT5EP21589 574 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 ETV6P41212 452 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 GNA13Q14344 377 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 ARHGEF6Q15052 776 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 C2orf27AQ580R0 203 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 LCTLQ6UWM7 567 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 VITQ6UXI7 678 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 CXXC5Q7LFL8 322 aaKnown RBP14.37□□□□□ -0.11
USP43-202ENST00000570475 SPRED2Q7Z698 418 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 SLC16A11Q8NCK7 471 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 SUN3Q8TAQ9 357 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 GNPDA2Q8TDQ7 276 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 CLIP3Q96DZ5 547 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 PRRC1Q96M27 445 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 CDCP1Q9H5V8 836 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 A0A0B4J203 849 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 MAB21L1Q13394 359 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 NNATQ16517 81 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 ESPNLQ6ZVH7 1005 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 CPA6Q8N4T0 437 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 SUN5Q8TC36 379 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 HMGB4Q8WW32 186 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 OR7D2Q96RA2 312 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 INSM2Q96T92 566 aaPredicted RBP14.37□□□□□ -0.11
USP43-202ENST00000570475 TAPBPLQ9BX59 468 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 PPIL3Q9H2H8 161 aaKnown RBP14.37□□□□□ -0.11
USP43-202ENST00000570475 SIRT3Q9NTG7 399 aaPredicted RBP14.37□□□□□ -0.11
USP43-202ENST00000570475 SAGE1Q9NXZ1 904 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 GBF1Q92538 1859 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 PLA2G10O15496 165 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 GRPRP30550 384 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 SSTR2P30874 369 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 DDOSTP39656 456 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 NAA10P41227 235 aaPredicted RBP14.37□□□□□ -0.11
USP43-202ENST00000570475 ADAM15Q13444 863 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 PRPF38BQ5VTL8 546 aaKnown RBP14.37□□□□□ -0.11
USP43-202ENST00000570475 KIF18BQ86Y91 864 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 PEX5LQ8IYB4 626 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 OR5H6Q8NGV6 325 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 GRPEL2Q8TAA5 225 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 LCN9Q8WX39 176 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 CDS1Q92903 461 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 GAL3ST1Q99999 423 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 ATP13A2Q9NQ11 1180 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 RASD1Q9Y272 281 aa14.37□□□□□ -0.11
USP43-202ENST00000570475 EXOSC1Q9Y3B2 195 aaKnown RBP14.37□□□□□ -0.11
USP43-202ENST00000570475 URB1O60287 2271 aaKnown RBP14.37□□□□□ -0.11
USP43-202ENST00000570475 A0A1W2PR48 441 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms