RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 ETFAP13804 333 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 RFX3P48380 749 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 RPP38P78345 283 aaKnown RBP15.39■□□□□ 0.05
COMMD4-224ENST00000568877 KLRB1Q12918 225 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 FADDQ13158 208 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 CAPRIN1Q14444 709 aaKnown RBP15.39■□□□□ 0.05
COMMD4-224ENST00000568877 KRT72Q14CN4 511 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 RGNQ15493 299 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.39■□□□□ 0.05
COMMD4-224ENST00000568877 PLEKHN1Q494U1 663 aaPredicted RBP15.39■□□□□ 0.05
COMMD4-224ENST00000568877 DCST2Q5T1A1 773 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 CCNJQ5T5M9 372 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 SLC22A10Q63ZE4 541 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 DESI1Q6ICB0 168 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 HEPHL1Q6MZM0 1159 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 FIGNL1Q6PIW4 674 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 PTRH1Q86Y79 214 aaKnown RBP15.39■□□□□ 0.05
COMMD4-224ENST00000568877 PSD4Q8NDX1 1056 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 SPPL2AQ8TCT8 520 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 PNPLA2Q96AD5 504 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 TMCO6Q96DC7 493 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 SECISBP2Q96T21 854 aaKnown RBP15.39■□□□□ 0.05
COMMD4-224ENST00000568877 G6PC3Q9BUM1 346 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 HES7Q9BYE0 225 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 KLHL1Q9NR64 748 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 ARL8BQ9NVJ2 186 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 CNIH4Q9P003 139 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 CORO2BQ9UQ03 480 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 CHCHD2Q9Y6H1 151 aaPredicted RBP15.39■□□□□ 0.05
COMMD4-224ENST00000568877 NUP214P35658 2090 aaPredicted RBP15.39■□□□□ 0.05
COMMD4-224ENST00000568877 CACNA1GO43497 2377 aa15.39■□□□□ 0.05
COMMD4-224ENST00000568877 FXYD1O00168 92 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 HS6ST1O60243 411 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 NME2P1O60361 137 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 P04436 131 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 CCL3P10147 92 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 CYP4B1P13584 511 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 GPX2P18283 190 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 NME2P22392 152 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 DSTNP60981 165 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 ARHGAP11BQ3KRB8 267 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 NANOGP8Q6NSW7 305 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 C16orf62Q7Z3J2 963 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 GALNT10Q86SR1 603 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 TMEM178AQ8NBL3 297 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 CHDHQ8NE62 594 aaPredicted RBP15.38■□□□□ 0.05
COMMD4-224ENST00000568877 ROPN1LQ96C74 230 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 NODALQ96S42 347 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 SLC39A3Q9BRY0 314 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 THUMPD3Q9BV44 507 aaKnown RBP15.38■□□□□ 0.05
COMMD4-224ENST00000568877 IKZF5Q9H5V7 419 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 NANOGQ9H9S0 305 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 SACM1LQ9NTJ5 587 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 FBXO34Q9NWN3 711 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 THUMPD1Q9NXG2 353 aaKnown RBP15.38■□□□□ 0.05
COMMD4-224ENST00000568877 TAGLN3Q9UI15 199 aa15.38■□□□□ 0.05
COMMD4-224ENST00000568877 CNOT11Q9UKZ1 510 aaKnown RBP15.38■□□□□ 0.05
COMMD4-224ENST00000568877 ATP6V1C1P21283 382 aa15.37■□□□□ 0.05
COMMD4-224ENST00000568877 LCN1P31025 176 aa15.37■□□□□ 0.05
COMMD4-224ENST00000568877 NUDT2P50583 147 aa15.37■□□□□ 0.05
COMMD4-224ENST00000568877 MTPNP58546 118 aa15.37■□□□□ 0.05
COMMD4-224ENST00000568877 ART3Q13508 389 aa15.37■□□□□ 0.05
COMMD4-224ENST00000568877 SELPLGQ14242 412 aa15.37■□□□□ 0.05
COMMD4-224ENST00000568877 GALNTL5Q7Z4T8 443 aa15.37■□□□□ 0.05
COMMD4-224ENST00000568877 ZAR1Q86SH2 424 aa15.37■□□□□ 0.05
COMMD4-224ENST00000568877 FBXW8Q8N3Y1 598 aa15.37■□□□□ 0.05
COMMD4-224ENST00000568877 OR8J3Q8NGG0 315 aa15.37■□□□□ 0.05
COMMD4-224ENST00000568877 SLC39A7Q92504 469 aa15.37■□□□□ 0.05
COMMD4-224ENST00000568877 BBC3Q96PG8 261 aaPredicted RBP15.37■□□□□ 0.05
COMMD4-224ENST00000568877 SDF2Q99470 211 aa15.37■□□□□ 0.05
COMMD4-224ENST00000568877 SH3GL1Q99961 368 aa15.37■□□□□ 0.05
COMMD4-224ENST00000568877 TRIM8Q9BZR9 551 aa15.37■□□□□ 0.05
COMMD4-224ENST00000568877 LIPT1Q9Y234 373 aa15.37■□□□□ 0.05
COMMD4-224ENST00000568877 KLF13Q9Y2Y9 288 aaPredicted RBP15.37■□□□□ 0.05
COMMD4-224ENST00000568877 PRAMEF27A3QJZ7 478 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 ANKRD33BA6NCL7 494 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 ICOSLGO75144 302 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 TNFRSF21O75509 655 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 STX11O75558 287 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 UTS2O95399 124 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 BMP2P12643 396 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 CNR1P21554 472 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 CASP3P42574 277 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 CPA2P48052 419 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 CBX1P83916 185 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 FUT5Q11128 374 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 GPAT3Q53EU6 434 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 TBCELQ5QJ74 424 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 PRAMEF20Q5VT98 475 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 RPUSD3Q6P087 351 aaKnown RBP15.36■□□□□ 0.05
COMMD4-224ENST00000568877 TMEM81Q6P7N7 255 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 HACD2Q6Y1H2 254 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 TRPM8Q7Z2W7 1104 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 SULF2Q8IWU5 870 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 C10orf111Q8N326 155 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 Q8NA96 180 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 TRNT1Q96Q11 434 aaKnown RBP15.36■□□□□ 0.05
COMMD4-224ENST00000568877 HOPXQ9BPY8 73 aaPredicted RBP15.36■□□□□ 0.05
COMMD4-224ENST00000568877 ANGPTL4Q9BY76 406 aa15.36■□□□□ 0.05
COMMD4-224ENST00000568877 METTL7AQ9H8H3 244 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms