RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 FBXW5Q969U6 566 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 ATP6V1E2Q96A05 226 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 EFHD2Q96C19 240 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 GMPPAQ96IJ6 420 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 ZNF681Q96N22 645 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 TACO1Q9BSH4 297 aaKnown RBP10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 FAIM2Q9BWQ8 316 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 PRRG4Q9BZD6 226 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 SLCO5A1Q9H2Y9 848 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 PTGES2Q9H7Z7 377 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 NOL11Q9H8H0 719 aaKnown RBP10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 ZBTB26Q9HCK0 441 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 SAYSD1Q9NPB0 183 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 PFDN4Q9NQP4 134 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 SDHAF3Q9NRP4 125 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 CDC42EP3Q9UKI2 254 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 GPR52Q9Y2T5 361 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 RNF115Q9Y4L5 304 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 AP4B1Q9Y6B7 739 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 HEATR5AQ86XA9 2040 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 OR7A17O14581 309 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 EIF3HO15372 352 aaKnown RBP eCLIP10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 SS18L1O75177 396 aaPredicted RBP10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 SIX3O95343 332 aaPredicted RBP10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 PSMB1P20618 241 aaKnown RBP10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 CCNG1P51959 295 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 CTBP2P56545 445 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 GALNT1Q10472 559 aaPredicted RBP10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 STX5Q13190 355 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 ACAP2Q15057 778 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 PPP4R4Q6NUP7 873 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 BEND4Q6ZU67 534 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 STK32CQ86UX6 486 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 PPM1NQ8N819 430 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 RAB3IL1Q8TBN0 382 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 TM4SF18Q96CE8 201 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 C1GALT1C1Q96EU7 318 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 ELOVL6Q9H5J4 265 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 ANKRA2Q9H9E1 313 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 MED11Q9P086 117 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 WHRNQ9P202 907 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 CPSF2Q9P2I0 782 aaKnown RBP10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 STOML1Q9UBI4 398 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 UTS2RQ9UKP6 389 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 ABCG2Q9UNQ0 655 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 SLC12A4Q9UP95 1085 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 LIPT1Q9Y234 373 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 OR10H1Q9Y4A9 318 aa10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 MAGED1Q9Y5V3 778 aaPredicted RBP10.57□□□□□ -0.72
GTF3C1-209ENST00000568569 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.56□□□□□ -0.729e-7■■■■■ 27.2
GTF3C1-209ENST00000568569 HAX1O00165 279 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 CLOCKO15516 846 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 ADAM11O75078 769 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 NME6O75414 186 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 IGHV4-39P01824 125 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 GSTA2P09210 222 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 DANCRP0C864 163 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 IL11P20809 199 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 CDKN1AP38936 164 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 EIF1AXP47813 144 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 SLC6A8P48029 635 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 IRF9Q00978 393 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 ZNF844Q08AG5 666 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 GLYR1Q49A26 553 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 GGTA1PQ4G0N0 100 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 SGO1Q5FBB7 561 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 C6orf52Q5T4I8 152 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 ALKBH2Q6NS38 261 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 KLC3Q6P597 504 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 DNM1P46Q6ZS02 220 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 SLC44A2Q8IWA5 706 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 CCDC116Q8IYX3 515 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 SAMD14Q8IZD0 417 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 STEAP2Q8NFT2 490 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 OR4N2Q8NGD1 307 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 OR9A2Q8NGT5 310 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 LILRB1Q8NHL6 650 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 UHMK1Q8TAS1 419 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 SMAP2Q8WU79 429 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 HS6ST2Q96MM7 605 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 NTMT1Q9BV86 223 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 ESRP2Q9H6T0 727 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 FOLH1BQ9HBA9 442 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 LRTM1Q9HBL6 345 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 BARX1Q9HBU1 254 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 NGBQ9NPG2 151 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 PAQR5Q9NXK6 330 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 TAS2R9Q9NYW1 312 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 MCTS1Q9ULC4 181 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 CLEC4AQ9UMR7 237 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 SNX24Q9Y343 169 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 SNX8Q9Y5X2 465 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 SVEP1Q4LDE5 3571 aa10.56□□□□□ -0.72
GTF3C1-209ENST00000568569 A0A1W2PP18 115 aa10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 EIF1AYO14602 144 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 FADS1O60427 444 aa10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 ESRRBO95718 433 aa10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 C2P06681 752 aa10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 CD3EP07766 207 aa10.55□□□□□ -0.72
GTF3C1-209ENST00000568569 THBS1P07996 1170 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms