RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 SERPINB9P50453 376 aa14□□□□□ -0.17
NME3-211ENST00000568561 SUCLG1P53597 346 aaKnown RBP14□□□□□ -0.17
NME3-211ENST00000568561 PNLIPRP2P54317 469 aa14□□□□□ -0.17
NME3-211ENST00000568561 ETF1P62495 437 aaKnown RBP14□□□□□ -0.17
NME3-211ENST00000568561 BTKQ06187 659 aa14□□□□□ -0.17
NME3-211ENST00000568561 CSTF3Q12996 717 aaKnown RBP14□□□□□ -0.17
NME3-211ENST00000568561 PRSS53Q2L4Q9 553 aa14□□□□□ -0.17
NME3-211ENST00000568561 UNC50Q53HI1 259 aa14□□□□□ -0.17
NME3-211ENST00000568561 ANKRD34AQ69YU3 496 aa14□□□□□ -0.17
NME3-211ENST00000568561 ZNF572Q7Z3I7 529 aaPredicted RBP14□□□□□ -0.17
NME3-211ENST00000568561 FAM9CQ8IZT9 166 aa14□□□□□ -0.17
NME3-211ENST00000568561 OR2M3Q8NG83 312 aa14□□□□□ -0.17
NME3-211ENST00000568561 FNDC9Q8TBE3 224 aa14□□□□□ -0.17
NME3-211ENST00000568561 C16orf78Q8WTQ4 265 aa14□□□□□ -0.17
NME3-211ENST00000568561 DCAKDQ8WVC6 231 aa14□□□□□ -0.17
NME3-211ENST00000568561 ZNF845Q96IR2 970 aaPredicted RBP14□□□□□ -0.17
NME3-211ENST00000568561 TMEM237Q96Q45 408 aa14□□□□□ -0.17
NME3-211ENST00000568561 KCNA7Q96RP8 456 aa14□□□□□ -0.17
NME3-211ENST00000568561 CCL19Q99731 98 aa14□□□□□ -0.17
NME3-211ENST00000568561 PINK1Q9BXM7 581 aa14□□□□□ -0.17
NME3-211ENST00000568561 RTN4RQ9BZR6 473 aa14□□□□□ -0.17
NME3-211ENST00000568561 SLC35C2Q9NQQ7 365 aa14□□□□□ -0.17
NME3-211ENST00000568561 GIMAP4Q9NUV9 329 aa14□□□□□ -0.17
NME3-211ENST00000568561 ZNF337Q9Y3M9 751 aa14□□□□□ -0.17
NME3-211ENST00000568561 USF3Q68DE3 2245 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 SHISA8B8ZZ34 492 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 GMFGO60234 142 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 CRHP06850 196 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 PEPDP12955 493 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 POU2F1P14859 743 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 CRYGSP22914 178 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 HMOX2P30519 316 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 TIA1P31483 386 aaKnown RBP eCLIP13.99□□□□□ -0.17
NME3-211ENST00000568561 UGT2B10P36537 528 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 MC3RP41968 323 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 RFX3P48380 749 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 DSCR4P56555 118 aaPredicted RBP13.99□□□□□ -0.17
NME3-211ENST00000568561 CLDN20P56880 219 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 EEF1A1P68104 462 aaKnown RBP13.99□□□□□ -0.17
NME3-211ENST00000568561 ACSM2AQ08AH3 577 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 RASA2Q15283 850 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 BCL2A1Q16548 175 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 EEF1A1P5Q5VTE0 462 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 ACSM2BQ68CK6 577 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 OR2A2Q6IF42 318 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 C22orf34Q6ZV56 151 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 GPRIN3Q6ZVF9 776 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 YTHDF3Q7Z739 585 aaKnown RBP13.99□□□□□ -0.17
NME3-211ENST00000568561 MEIOBQ8N635 442 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 GBP7Q8N8V2 638 aaPredicted RBP13.99□□□□□ -0.17
NME3-211ENST00000568561 FADS6Q8N9I5 356 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 NUDT8Q8WV74 236 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 ERP27Q96DN0 273 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 FUT8Q9BYC5 575 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 ZNF226Q9NYT6 803 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 MRPS18CQ9Y3D5 142 aaKnown RBP13.99□□□□□ -0.17
NME3-211ENST00000568561 TIMM22Q9Y584 194 aa13.99□□□□□ -0.17
NME3-211ENST00000568561 SONP18583 2426 aaKnown RBP13.98□□□□□ -0.17
NME3-211ENST00000568561 OR2M5A3KFT3 312 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 KIAA1324LA8MWY0 1029 aaPredicted RBP13.98□□□□□ -0.17
NME3-211ENST00000568561 PLOD3O60568 738 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 ULK1O75385 1050 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 JUNP05412 331 aaKnown RBP13.98□□□□□ -0.17
NME3-211ENST00000568561 HSD3B1P14060 373 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 HSD3B2P26439 372 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 PSG6Q00889 435 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 PON3Q15166 354 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 ACKR1Q16570 336 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 ZNF678Q5SXM1 525 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 PPP4R4Q6NUP7 873 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 TMEM107Q6UX40 140 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 PRIMA1Q86XR5 153 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 LRRC75A-AS1Q8N1F1 130 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 ZNF610Q8N9Z0 462 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 METTL6Q8TCB7 284 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 IFT81Q8WYA0 676 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 PIGTQ969N2 578 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 DTNBP1Q96EV8 351 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 MARK4Q96L34 752 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 BBS4Q96RK4 519 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 ZNF382Q96SR6 550 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 TAS2R9Q9NYW1 312 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 TMEM216Q9P0N5 145 aa13.98□□□□□ -0.17
NME3-211ENST00000568561 DMGDHQ9UI17 866 aaKnown RBP13.98□□□□□ -0.17
NME3-211ENST00000568561 COL6A5A8TX70 2615 aa13.97□□□□□ -0.17
NME3-211ENST00000568561 ATRQ13535 2644 aa13.97□□□□□ -0.17
NME3-211ENST00000568561 FADS1O60427 444 aa13.97□□□□□ -0.17
NME3-211ENST00000568561 DLX3O60479 287 aa13.97□□□□□ -0.17
NME3-211ENST00000568561 CGAP01215 116 aa13.97□□□□□ -0.17
NME3-211ENST00000568561 ANXA4P09525 319 aaPredicted RBP13.97□□□□□ -0.17
NME3-211ENST00000568561 LOXP28300 417 aaPredicted RBP13.97□□□□□ -0.17
NME3-211ENST00000568561 NCBP2P52298 156 aaKnown RBP eCLIP13.97□□□□□ -0.175e-6■■□□□ 11.5
NME3-211ENST00000568561 MRPS22P82650 360 aaKnown RBP13.97□□□□□ -0.17
NME3-211ENST00000568561 CKAP4Q07065 602 aaKnown RBP13.97□□□□□ -0.17
NME3-211ENST00000568561 HEPACAMQ14CZ8 416 aa13.97□□□□□ -0.17
NME3-211ENST00000568561 EXOC3L2Q2M3D2 409 aa13.97□□□□□ -0.17
NME3-211ENST00000568561 SPIN4Q56A73 249 aa13.97□□□□□ -0.17
NME3-211ENST00000568561 MARCH3Q86UD3 253 aa13.97□□□□□ -0.17
NME3-211ENST00000568561 RELL1Q8IUW5 271 aa13.97□□□□□ -0.17
NME3-211ENST00000568561 PPP1R14CQ8TAE6 165 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms