RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 IQCGQ9H095 443 aaKnown RBP18.3■□□□□ 0.52
CLN6-207ENST00000566347 CLEC4MQ9H2X3 399 aaPredicted RBP18.3■□□□□ 0.52
CLN6-207ENST00000566347 C12orf65Q9H3J6 166 aaKnown RBP18.3■□□□□ 0.52
CLN6-207ENST00000566347 L2HGDHQ9H9P8 463 aa18.3■□□□□ 0.52
CLN6-207ENST00000566347 LRTM1Q9HBL6 345 aa18.3■□□□□ 0.52
CLN6-207ENST00000566347 RASSF1Q9NS23 344 aa18.3■□□□□ 0.52
CLN6-207ENST00000566347 JKAMPQ9P055 326 aa18.3■□□□□ 0.52
CLN6-207ENST00000566347 MED13LQ71F56 2210 aa18.29■□□□□ 0.52
CLN6-207ENST00000566347 FAM221AA4D161 298 aa18.29■□□□□ 0.52
CLN6-207ENST00000566347 TUBAL3A6NHL2 446 aa18.29■□□□□ 0.52
CLN6-207ENST00000566347 A6NNC1 897 aa18.29■□□□□ 0.52
CLN6-207ENST00000566347 CLCA1A8K7I4 914 aa18.29■□□□□ 0.52
CLN6-207ENST00000566347 AZIN1O14977 448 aa18.29■□□□□ 0.52
CLN6-207ENST00000566347 CHEK2O96017 543 aa18.29■□□□□ 0.52
CLN6-207ENST00000566347 CLK3P49761 638 aaKnown RBP18.29■□□□□ 0.52
CLN6-207ENST00000566347 AGFG1P52594 562 aaKnown RBP18.29■□□□□ 0.52
CLN6-207ENST00000566347 PSMD4P55036 377 aaKnown RBP18.29■□□□□ 0.52
CLN6-207ENST00000566347 EEF1A1P68104 462 aaKnown RBP18.29■□□□□ 0.52
CLN6-207ENST00000566347 BCL2A1Q16548 175 aa18.29■□□□□ 0.52
CLN6-207ENST00000566347 EEF1A1P5Q5VTE0 462 aa18.29■□□□□ 0.52
CLN6-207ENST00000566347 C10orf107Q8IVU9 208 aa18.29■□□□□ 0.52
CLN6-207ENST00000566347 NINJ1Q92982 152 aa18.29■□□□□ 0.52
CLN6-207ENST00000566347 CCT7Q99832 543 aa18.29■□□□□ 0.52
CLN6-207ENST00000566347 GPATCH1Q9BRR8 931 aaKnown RBP18.29■□□□□ 0.52
CLN6-207ENST00000566347 LMF2Q9BU23 707 aaKnown RBP18.29■□□□□ 0.52
CLN6-207ENST00000566347 C3orf14Q9HBI5 128 aa18.29■□□□□ 0.52
CLN6-207ENST00000566347 CLCF1Q9UBD9 225 aa18.29■□□□□ 0.52
CLN6-207ENST00000566347 EDARQ9UNE0 448 aa18.29■□□□□ 0.52
CLN6-207ENST00000566347 AKAP6Q13023 2319 aa18.29■□□□□ 0.52
CLN6-207ENST00000566347 PDPK1O15530 556 aa18.28■□□□□ 0.52
CLN6-207ENST00000566347 SCO2O43819 266 aa18.28■□□□□ 0.52
CLN6-207ENST00000566347 FADS1O60427 444 aa18.28■□□□□ 0.52
CLN6-207ENST00000566347 ZIC3O60481 467 aa18.28■□□□□ 0.52
CLN6-207ENST00000566347 TRIM13O60858 407 aa18.28■□□□□ 0.52
CLN6-207ENST00000566347 IL33O95760 270 aa18.28■□□□□ 0.52
CLN6-207ENST00000566347 ZNF708P17019 499 aa18.28■□□□□ 0.52
CLN6-207ENST00000566347 TACR1P25103 407 aa18.28■□□□□ 0.52
CLN6-207ENST00000566347 STARP49675 285 aa18.28■□□□□ 0.52
CLN6-207ENST00000566347 ART1P52961 327 aa18.28■□□□□ 0.52
CLN6-207ENST00000566347 CLDN18P56856 261 aa18.28■□□□□ 0.52
CLN6-207ENST00000566347 GAB1Q13480 694 aa18.28■□□□□ 0.52
CLN6-207ENST00000566347 GANABQ14697 944 aaKnown RBP18.28■□□□□ 0.52
CLN6-207ENST00000566347 PCLAFQ15004 111 aa18.28■□□□□ 0.52
CLN6-207ENST00000566347 DAZAP2Q15038 168 aaPredicted RBP18.28■□□□□ 0.52
CLN6-207ENST00000566347 FADS6Q8N9I5 356 aa18.28■□□□□ 0.52
CLN6-207ENST00000566347 ZFP28Q8NHY6 868 aa18.28■□□□□ 0.52
CLN6-207ENST00000566347 EGLN2Q96KS0 407 aa18.28■□□□□ 0.52
CLN6-207ENST00000566347 G6PC3Q9BUM1 346 aa18.28■□□□□ 0.52
CLN6-207ENST00000566347 GATA5Q9BWX5 397 aaPredicted RBP18.28■□□□□ 0.52
CLN6-207ENST00000566347 FAM120CQ9NX05 1096 aaKnown RBP18.28■□□□□ 0.52
CLN6-207ENST00000566347 MKS1Q9NXB0 559 aa18.28■□□□□ 0.52
CLN6-207ENST00000566347 RPH3AQ9Y2J0 694 aaPredicted RBP18.28■□□□□ 0.52
CLN6-207ENST00000566347 MPDZO75970 2070 aa18.27■□□□□ 0.52
CLN6-207ENST00000566347 EPXP11678 715 aa18.27■□□□□ 0.52
CLN6-207ENST00000566347 GRAMD2AQ8IUY3 354 aa18.27■□□□□ 0.52
CLN6-207ENST00000566347 RIBC1Q8N443 379 aaPredicted RBP18.27■□□□□ 0.52
CLN6-207ENST00000566347 GOT1L1Q8NHS2 421 aaPredicted RBP18.27■□□□□ 0.52
CLN6-207ENST00000566347 NRGNQ92686 78 aa18.27■□□□□ 0.52
CLN6-207ENST00000566347 INTS12Q96CB8 462 aaKnown RBP18.27■□□□□ 0.52
CLN6-207ENST00000566347 RMND5BQ96G75 393 aaPredicted RBP18.27■□□□□ 0.52
CLN6-207ENST00000566347 APOPT1Q96IL0 206 aa18.27■□□□□ 0.52
CLN6-207ENST00000566347 FCRL1Q96LA6 429 aa18.27■□□□□ 0.52
CLN6-207ENST00000566347 PIGMQ9H3S5 423 aa18.27■□□□□ 0.52
CLN6-207ENST00000566347 DSN1Q9H410 356 aa18.27■□□□□ 0.52
CLN6-207ENST00000566347 PTGES2Q9H7Z7 377 aa18.27■□□□□ 0.52
CLN6-207ENST00000566347 TMED5Q9Y3A6 229 aa18.27■□□□□ 0.52
CLN6-207ENST00000566347 PTGDR2Q9Y5Y4 395 aa18.27■□□□□ 0.52
CLN6-207ENST00000566347 MED12LQ86YW9 2145 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 TLDC2A0PJX2 215 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 B4DXG7 233 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 LINC01387J3KSC0 135 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 HCRTR2O43614 444 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 TBX19O60806 448 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 GOSR1O95249 250 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 KCNH1O95259 989 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 PEPDP12955 493 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 TCEA1P23193 301 aaKnown RBP18.26■□□□□ 0.51
CLN6-207ENST00000566347 GPC1P35052 558 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 B3GALT5-AS1P59052 145 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 FOXF2Q12947 444 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 HSPB3Q12988 150 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 VPS26BQ4G0F5 336 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 KANK2Q63ZY3 851 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 Q6ZSR9 355 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 CHMP1BQ7LBR1 199 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 ZNF551Q7Z340 670 aaPredicted RBP18.26■□□□□ 0.51
CLN6-207ENST00000566347 OR2M3Q8NG83 312 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 CEP70Q8NHQ1 597 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 GFM2Q969S9 779 aaKnown RBP18.26■□□□□ 0.51
CLN6-207ENST00000566347 PPCDCQ96CD2 204 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 ZBED6CLQ96FA7 236 aaPredicted RBP18.26■□□□□ 0.51
CLN6-207ENST00000566347 RBM24Q9BX46 236 aaKnown RBP18.26■□□□□ 0.51
CLN6-207ENST00000566347 REEP4Q9H6H4 257 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 ST6GALNAC2Q9UJ37 374 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 FIS1Q9Y3D6 152 aa18.26■□□□□ 0.51
CLN6-207ENST00000566347 HRNRQ86YZ3 2850 aaPredicted RBP18.25■□□□□ 0.51
CLN6-207ENST00000566347 ITPR3Q14573 2671 aa18.25■□□□□ 0.51
CLN6-207ENST00000566347 PRPS2P11908 318 aa18.25■□□□□ 0.51
CLN6-207ENST00000566347 DDX5P17844 614 aaKnown RBP18.25■□□□□ 0.51
CLN6-207ENST00000566347 SDC1P18827 310 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms