RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 CLDN18P56856 261 aa13.33□□□□□ -0.28
USB1-210ENST00000565151 ZNF155Q12901 538 aaPredicted RBP13.33□□□□□ -0.28
USB1-210ENST00000565151 PDE7AQ13946 482 aa13.33□□□□□ -0.28
USB1-210ENST00000565151 ARL13AQ5H913 290 aaPredicted RBP13.33□□□□□ -0.28
USB1-210ENST00000565151 SH2D4BQ5SQS7 431 aa13.33□□□□□ -0.28
USB1-210ENST00000565151 IKBIPQ70UQ0 350 aa13.33□□□□□ -0.28
USB1-210ENST00000565151 ZAR1Q86SH2 424 aa13.33□□□□□ -0.28
USB1-210ENST00000565151 CLYBLQ8N0X4 340 aa13.33□□□□□ -0.28
USB1-210ENST00000565151 OR2M3Q8NG83 312 aa13.33□□□□□ -0.28
USB1-210ENST00000565151 OR6Y1Q8NGX8 325 aa13.33□□□□□ -0.28
USB1-210ENST00000565151 OR14L1PQ8NHC6 308 aa13.33□□□□□ -0.28
USB1-210ENST00000565151 ZPLD1Q8TCW7 415 aa13.33□□□□□ -0.28
USB1-210ENST00000565151 GIMAP5Q96F15 307 aa13.33□□□□□ -0.28
USB1-210ENST00000565151 C3orf30Q96M34 536 aa13.33□□□□□ -0.28
USB1-210ENST00000565151 TSSK3Q96PN8 268 aa13.33□□□□□ -0.28
USB1-210ENST00000565151 FAM111AQ96PZ2 611 aa13.33□□□□□ -0.28
USB1-210ENST00000565151 LMF2Q9BU23 707 aaKnown RBP13.33□□□□□ -0.28
USB1-210ENST00000565151 STMN4Q9H169 189 aaPredicted RBP13.33□□□□□ -0.28
USB1-210ENST00000565151 CALHM2Q9HA72 323 aa13.33□□□□□ -0.28
USB1-210ENST00000565151 MIEF1Q9NQG6 463 aa13.33□□□□□ -0.28
USB1-210ENST00000565151 CRIM1Q9NZV1 1036 aa13.33□□□□□ -0.28
USB1-210ENST00000565151 ITPR3Q14573 2671 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 H0YC42 278 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 H3BQF6 201 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 SLC28A1O00337 649 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 SCO2O43819 266 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 FGF4P08620 206 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 UQCRC1P31930 480 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 FRKP42685 505 aaPredicted RBP13.32□□□□□ -0.28
USB1-210ENST00000565151 TPD52P55327 224 aaPredicted RBP13.32□□□□□ -0.28
USB1-210ENST00000565151 NAA20P61599 178 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 SRYQ05066 204 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 HSPB3Q12988 150 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 MYBPHQ13203 477 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 EFR3AQ14156 821 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 GALNT10Q86SR1 603 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 EXOC3L1Q86VI1 746 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 OR5M1Q8NGP8 315 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 TCP10LQ8TDR4 215 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.32□□□□□ -0.283e-11■■■■■ 52.2
USB1-210ENST00000565151 PIK3R3Q92569 461 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 RNASE6Q93091 150 aaKnown RBP13.32□□□□□ -0.28
USB1-210ENST00000565151 METTL2AQ96IZ6 378 aaKnown RBP13.32□□□□□ -0.28
USB1-210ENST00000565151 UCN2Q96RP3 112 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 NPAS1Q99742 590 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 DSN1Q9H410 356 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 FBXO34Q9NWN3 711 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 MED11Q9P086 117 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 CLCF1Q9UBD9 225 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 ZNF629Q9UEG4 869 aaPredicted RBP13.32□□□□□ -0.28
USB1-210ENST00000565151 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.32□□□□□ -0.28
USB1-210ENST00000565151 CBLCQ9ULV8 474 aa13.32□□□□□ -0.28
USB1-210ENST00000565151 RPH3AQ9Y2J0 694 aaPredicted RBP13.32□□□□□ -0.28
USB1-210ENST00000565151 WBP11Q9Y2W2 641 aaKnown RBP13.32□□□□□ -0.28
USB1-210ENST00000565151 MRPS18CQ9Y3D5 142 aaKnown RBP13.32□□□□□ -0.28
USB1-210ENST00000565151 V9GYY5 206 aaPredicted RBP13.32□□□□□ -0.28
USB1-210ENST00000565151 CLCA1A8K7I4 914 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 FAM47E-STBD1D6RA91 191 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 PIP5K1BO14986 540 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 NPHS1O60500 1241 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 TBX19O60806 448 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 COQ9O75208 318 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 IL33O95760 270 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 TGM6O95932 706 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 IL2RAP01589 272 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 ACP2P11117 423 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 BCKDHAP12694 445 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 ZNF708P17019 499 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 CTSSP25774 331 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 IL12BP29460 328 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 DNAJA1P31689 397 aaKnown RBP13.31□□□□□ -0.28
USB1-210ENST00000565151 ASCL1P50553 236 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 RPL38P63173 70 aaKnown RBP13.31□□□□□ -0.28
USB1-210ENST00000565151 CYP27C1Q4G0S4 372 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 EXOSC6Q5RKV6 272 aaKnown RBP13.31□□□□□ -0.28
USB1-210ENST00000565151 MARCH3Q86UD3 253 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 IFNEQ86WN2 208 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 CNPY4Q8N129 248 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 TWIST2Q8WVJ9 160 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 OTUB1Q96FW1 271 aaPredicted RBP13.31□□□□□ -0.28
USB1-210ENST00000565151 C16orf58Q96GQ5 468 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 CCT7Q99832 543 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 REEP4Q9H6H4 257 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 ZNF395Q9H8N7 513 aaPredicted RBP13.31□□□□□ -0.28
USB1-210ENST00000565151 SIRT3Q9NTG7 399 aaPredicted RBP13.31□□□□□ -0.28
USB1-210ENST00000565151 DDX18Q9NVP1 670 aaKnown RBP13.31□□□□□ -0.28
USB1-210ENST00000565151 SENP1Q9P0U3 644 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 NTMQ9P121 344 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 ZDHHC2Q9UIJ5 367 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 OR10H1Q9Y4A9 318 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 TRAF6Q9Y4K3 522 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 ZFHX3Q15911 3703 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 FREM1Q5H8C1 2179 aa13.31□□□□□ -0.28
USB1-210ENST00000565151 SHISA8B8ZZ34 492 aa13.3□□□□□ -0.28
USB1-210ENST00000565151 DVL2O14641 736 aa13.3□□□□□ -0.28
USB1-210ENST00000565151 RGS14O43566 566 aa13.3□□□□□ -0.28
USB1-210ENST00000565151 TYROBPO43914 113 aa13.3□□□□□ -0.28
USB1-210ENST00000565151 RCBTB2O95199 551 aa13.3□□□□□ -0.28
USB1-210ENST00000565151 TMIGD3P0DMS9 266 aaPredicted RBP13.3□□□□□ -0.28
USB1-210ENST00000565151 DPP4P27487 766 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms