RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 C9orf106Q8NAJ2 232 aa13.61□□□□□ -0.23
SPG7-210ENST00000564409 OR4K17Q8NGC6 315 aa13.61□□□□□ -0.23
SPG7-210ENST00000564409 CDC26Q8NHZ8 85 aa13.61□□□□□ -0.23
SPG7-210ENST00000564409 EFHD2Q96C19 240 aaPredicted RBP13.61□□□□□ -0.23
SPG7-210ENST00000564409 ELP4Q96EB1 424 aa13.61□□□□□ -0.23
SPG7-210ENST00000564409 SFXN2Q96NB2 322 aa13.61□□□□□ -0.23
SPG7-210ENST00000564409 AMDHD1Q96NU7 426 aa13.61□□□□□ -0.23
SPG7-210ENST00000564409 GPATCH1Q9BRR8 931 aaKnown RBP13.61□□□□□ -0.23
SPG7-210ENST00000564409 DDX18Q9NVP1 670 aaKnown RBP13.61□□□□□ -0.23
SPG7-210ENST00000564409 FAM120CQ9NX05 1096 aaKnown RBP13.61□□□□□ -0.23
SPG7-210ENST00000564409 PPP4R1LQ9P1A2 415 aa13.61□□□□□ -0.23
SPG7-210ENST00000564409 CLCF1Q9UBD9 225 aa13.61□□□□□ -0.23
SPG7-210ENST00000564409 ST6GALNAC2Q9UJ37 374 aa13.61□□□□□ -0.23
SPG7-210ENST00000564409 FBXL2Q9UKC9 423 aa13.61□□□□□ -0.23
SPG7-210ENST00000564409 CBLCQ9ULV8 474 aa13.61□□□□□ -0.23
SPG7-210ENST00000564409 AKAP9Q99996 3911 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 CLCA1A8K7I4 914 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 COPEO14579 308 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 RGS14O43566 566 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 FADS1O60427 444 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 SEC22BO75396 215 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 IL33O95760 270 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 NEFHP12036 1026 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 DDX5P17844 614 aaKnown RBP13.6□□□□□ -0.23
SPG7-210ENST00000564409 DNASE1P24855 282 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 TACR1P25103 407 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 MC3RP41968 323 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 SLCO1A2P46721 670 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 CLDN18P56856 261 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 SRYQ05066 204 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 GLYR1Q49A26 553 aaPredicted RBP13.6□□□□□ -0.23
SPG7-210ENST00000564409 VPS26BQ4G0F5 336 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 FAM219BQ5XKK7 198 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 OR2A2Q6IF42 318 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 CHMP1BQ7LBR1 199 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 FADS6Q8N9I5 356 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 CCDC63Q8NA47 563 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 UBLCP1Q8WVY7 318 aaPredicted RBP13.6□□□□□ -0.23
SPG7-210ENST00000564409 LMF2Q9BU23 707 aaKnown RBP13.6□□□□□ -0.23
SPG7-210ENST00000564409 PCNX3Q9H6A9 2034 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 PTGES2Q9H7Z7 377 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 C1orf109Q9NX04 203 aa13.6□□□□□ -0.23
SPG7-210ENST00000564409 POLR3HQ9Y535 204 aaPredicted RBP13.6□□□□□ -0.23
SPG7-210ENST00000564409 PRRC2AP48634 2157 aaKnown RBP13.59□□□□□ -0.23
SPG7-210ENST00000564409 UPK1AO00322 258 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 HCRTR2O43614 444 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 TBX19O60806 448 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 CHEK2O96017 543 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 KRT4P19013 534 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 OCRLQ01968 901 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 KIAA0040Q15053 153 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 TMEM107Q6UX40 140 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 CDC20BQ86Y33 519 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 GRAMD2AQ8IUY3 354 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 MEIOBQ8N635 442 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 OR4N2Q8NGD1 307 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 CEP70Q8NHQ1 597 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 ZFP28Q8NHY6 868 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 MBD6Q96DN6 1003 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 TRIM44Q96DX7 344 aaPredicted RBP13.59□□□□□ -0.23
SPG7-210ENST00000564409 DACH2Q96NX9 599 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 CCT7Q99832 543 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 G6PC3Q9BUM1 346 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 RBM24Q9BX46 236 aaKnown RBP13.59□□□□□ -0.23
SPG7-210ENST00000564409 GLIPR2Q9H4G4 154 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 STOML1Q9UBI4 398 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 TMED5Q9Y3A6 229 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 CCL27Q9Y4X3 112 aa13.59□□□□□ -0.23
SPG7-210ENST00000564409 ITPR3Q14573 2671 aa13.58□□□□□ -0.23
SPG7-210ENST00000564409 MSTNO14793 375 aa13.58□□□□□ -0.24
SPG7-210ENST00000564409 AZIN1O14977 448 aa13.58□□□□□ -0.24
SPG7-210ENST00000564409 PDPK1O15530 556 aa13.58□□□□□ -0.24
SPG7-210ENST00000564409 TRIM13O60858 407 aa13.58□□□□□ -0.24
SPG7-210ENST00000564409 KCNH1O95259 989 aa13.58□□□□□ -0.24
SPG7-210ENST00000564409 SHBGP04278 402 aa13.58□□□□□ -0.24
SPG7-210ENST00000564409 CPA2P48052 419 aa13.58□□□□□ -0.24
SPG7-210ENST00000564409 STARP49675 285 aa13.58□□□□□ -0.24
SPG7-210ENST00000564409 SLC18A2Q05940 514 aa13.58□□□□□ -0.24
SPG7-210ENST00000564409 SNTB1Q13884 538 aaKnown RBP13.58□□□□□ -0.24
SPG7-210ENST00000564409 FGFBP1Q14512 234 aa13.58□□□□□ -0.24
SPG7-210ENST00000564409 SH2D4BQ5SQS7 431 aa13.58□□□□□ -0.24
SPG7-210ENST00000564409 FBXW10Q5XX13 1052 aa13.58□□□□□ -0.24
SPG7-210ENST00000564409 OR5M10Q6IEU7 315 aa13.58□□□□□ -0.24
SPG7-210ENST00000564409 OR2M3Q8NG83 312 aa13.58□□□□□ -0.24
SPG7-210ENST00000564409 NRGNQ92686 78 aa13.58□□□□□ -0.24
SPG7-210ENST00000564409 HOXB13Q92826 284 aaPredicted RBP13.58□□□□□ -0.24
SPG7-210ENST00000564409 INTS12Q96CB8 462 aaKnown RBP13.58□□□□□ -0.24
SPG7-210ENST00000564409 ZBED6CLQ96FA7 236 aaPredicted RBP13.58□□□□□ -0.24
SPG7-210ENST00000564409 FCRL1Q96LA6 429 aa13.58□□□□□ -0.24
SPG7-210ENST00000564409 ALPK1Q96QP1 1244 aa13.58□□□□□ -0.24
SPG7-210ENST00000564409 DSN1Q9H410 356 aa13.58□□□□□ -0.24
SPG7-210ENST00000564409 LRTM1Q9HBL6 345 aa13.58□□□□□ -0.24
SPG7-210ENST00000564409 MKS1Q9NXB0 559 aa13.58□□□□□ -0.24
SPG7-210ENST00000564409 PACSIN3Q9UKS6 424 aa13.58□□□□□ -0.24
SPG7-210ENST00000564409 IGLV3-32A0A0A0MS00 114 aa13.57□□□□□ -0.24
SPG7-210ENST00000564409 A8MXE2 369 aa13.57□□□□□ -0.24
SPG7-210ENST00000564409 SCO2O43819 266 aa13.57□□□□□ -0.24
SPG7-210ENST00000564409 NME6O75414 186 aaPredicted RBP13.57□□□□□ -0.24
SPG7-210ENST00000564409 TNFRSF21O75509 655 aa13.57□□□□□ -0.24
SPG7-210ENST00000564409 FGF4P08620 206 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms